Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031042.1
Length=111325
Score E
Sequences producing significant alignments: (Bits) Value
seq426744 205 7e-48
seq507483 185 6e-42
seq466100 131 1e-25
seq506238 129 4e-25
seq435060 116 3e-21
seq511551 105 5e-18
seq450559 96.9 2e-15
seq351952 96.9 2e-15
>seq426744
Length=341
Score = 205 bits (226), Expect = 7e-48
Identities = 238/314 (76%), Gaps = 8/314 (3%)
Strand=Plus/Plus
Query 71550 ATTAAGATGCAGCGTAAGCACCGGATACAACGCCATT---TGCAAAGTAACGTTGCAGGT 71606
|||| | ||| ||||| | ||| | || | || || ||||| |||||| ||||
Sbjct 29 ATTACGCTGCTGCGTATGTACCAGTAACGATACCTTTACCTGCAATCATACGTTGTAGGT 88
Query 71607 TAACACGCTGAGTAACGTAGTACGCATCACGCTGTTTACCAGCTTGGCGCTCACGTTCAA 71666
||| ||| ||||| |||||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct 89 TAAGACGTTGAGTTACGTAGTATGCATCACGTTGCTTACCAGCTTGACGCTCACGTTCTA 148
Query 71667 CAGTAACAGCACGCTGACGCGGCATTACGAAGTTATCTTTATAAACAATAACTGCGAACT 71726
| |||| || ||| ||||| || | |||||||| || ||||| ||| ||| |
Sbjct 149 CTGTAATAGTACGTTGACGAGGAACAACGAAGTTCTCACGGTAAACGATAGTACAGAATT 208
Query 71727 CTTTATCTG-CTGCTTTAGCTGGGAAGTACTCAGAAACTACAACCGGCAGACCATAAATA 71785
| | | ||| | ||||||||||||||||| | |||||||| ||| | ||||| || |||
Sbjct 209 C-TGAACTGACAGCTTTAGCTGGGAAGTAGTTAGAAACTAGAACTGCTAGACCGTAGATA 267
Query 71786 CGACCAACCTGACCCTGCAG-TTTAAC-AG-CATCGTTACCAACCTGTGCAACATCCTGC 71842
|||||||| || || || || |||||| || ||| |||||| || ||||||||||
Sbjct 268 CGACCAACTTGTCCTTGAAGTTTTAACGAGTTATCCGCACCAACTTGGTTAACATCCTGC 327
Query 71843 CATTCTTCATCTTC 71856
||||||||||||||
Sbjct 328 CATTCTTCATCTTC 341
>seq507483
Length=1083
Score = 185 bits (204), Expect = 6e-42
Identities = 476/711 (67%), Gaps = 27/711 (4%)
Strand=Plus/Plus
Query 40904 ATTGATGCAGATGGTTGCATT--CGTACTGGCTTCCACGAACACATGACTACTTCTGGTC 40961
||||| ||||||| |||| ||||| || || | |||||| ||| ||||| ||||
Sbjct 372 ATTGACCGAGATGGT--CATTTACGTACAGGGTTTAGCCAACACACGACCACTTCGGGTC 429
Query 40962 GTCTGAGTTCTTCTGGTAAGCTGAACCTGCAACAGTTACCTCGTGATGAATCTATTATCA 41021
|||| ||||| || || || || ||| | || || | ||||||||||| |||| | |
Sbjct 430 GTCTAAGTTCATCAGGCAAACTTAACTTACAGCAACTTCCTCGTGATGATGCTATGGTTA 489
Query 41022 AGGGTTGTGTAGTAGCTCCTCCCGGGTATCGTGTAATCGCATGGGACTTAACAACTGCGG 41081
|||| ||| | ||||||||| | || ||| | ||| | || ||| | ||||||||
Sbjct 490 AGGGATGTATTGTAGCTCCTGCGGGCTATAGAGTAGTAGCCGTGGATATGGAAACTGCGG 549
Query 41082 AAGTTTATTATGCTGCTGTTCTATCTGGTGATAGAA-ATATGCAACAAGTATTT-ATCAA 41139
|| | | || || | || ||| |||| || | | || |||| ||| | | |
Sbjct 550 AAATGTGGGTAGCAGCAGCACTTAGTGGGGATAAAAGACCTACAGAAAGTGTTTTAACGA 609
Query 41140 TATGAGAAATGAACCTGATAAATACCCTGACTTCCAC---TCTAACATCGCACACATGGT 41196
|||| | | || | || | ||||||||| |||| | |||||||||||
Sbjct 610 TATGGCTGACAAGTCTATTGTATCTGCCGACTTCCACAGCTCTA---TTGCACACATGGT 666
Query 41197 ATTTAAGCTCCAATGCGAACCTCGTGATGTTAAAAAGT-TATTCCCAGCTCTGCGTCAGG 41255
|| |||| | || | | | ||| |||||| | | ||||| || | |||||||
Sbjct 667 GTTCAAGCCAAACTGTCTAGCGCATGAA-TTAAAAGCTATGTTCCCTGCATTACGTCAGG 725
Query 41256 CAGCTAAAGCAATCACCTTTGGTATTCTGTATGGTTCTGGCCCAGCTAAAGTAGCTCATT 41315
| ||||||| || | || |||||||| | ||| ||| |||||||| ||||| | |
Sbjct 726 CTTCTAAAGCTATTTCATTCGGTATTCTATTCGGTAGTGGACCAGCTAAGGTAGCAGAAT 785
Query 41316 CTGTTAACGAAGCTCTTTTGGAACAGGCTGCTAAGACAGGCGAACCGTTTGTAGAATGTA 41375
|| |||| || | || || || || || ||||| || || | | || ||
Sbjct 786 CTATTAATGAGTCGCTATTTGAGCAACATGTAAAGACGGGTTGCCCTTACG---AACCTA 842
Query 41376 TGGTTGCAGAT---GCTAAAGAGTACATTGAAACGTACTTCGGTCAGTTCCCGCAGCTTA 41432
| | | ||| |||||||| |||||||| ||||| ||| ||||| | || |
Sbjct 843 TTGATAAAGAAACAGCTAAAGATTACATTGATGTTTACTTTAGTCGTTTCCCTGACCTGA 902
Query 41433 AGCGTTGGATTGATAAGTGTCACGACCAGATCAAGAATCATGGGTTTATCTATAGTCACT 41492
| ||||||||||| || || || ||||| | ||||||||||| ||||| ||||
Sbjct 903 AACGTTGGATTGACGCGTCCCATGAGCAGATTCTACAGCATGGGTTTATTTATAGCCACT 962
Query 41493 TCGGTCGTAAACGTCGTCTGCATAATATCCACTC--CGAAGACCGTG-GTGTTCAGGGCG 41549
|||| ||||||||| | || | |||||||| ||| || | | | |||| || |
Sbjct 963 TCGGACGTAAACGTAGACTACGTAATATCCGCTCAGCGTCTAGAGAGACTGTT---GGTG 1019
Query 41550 AAGAAATT-CGTTCTGGATTTAACGCAATCATTCAGTCTGCTTCTTCTGAT 41599
|||| || ||||| || || ||||| |||||||| || || ||||||
Sbjct 1020 AAGAGCTTACGTTCAGGCTTCAACGCTATCATTCAAGGGGCATCATCTGAT 1070
>seq466100
Length=556
Score = 131 bits (144), Expect = 1e-25
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 72290 TCTGGTTCAACTAGCATAGTAAGAATCTTACTAGACATCGGCAATTCTTCGAACAGTGCA 72349
||||| |||| | |||||||||||||||||||| ||| || | |||||||| | |
Sbjct 6 TCTGGCTCAATCATCATAGTAAGAATCTTACTAGTCATTGGAAGCTCTTCGAATAAGTTA 65
Query 72350 CCAACTACCAGCTCTTTCTGCAGATCACGAATGATACGCTGGGAGAAAATAGTTTCATAG 72409
|| || |||| ||||||| |||||| | |||||| || ||||||||||| || |||
Sbjct 66 CCTACAACCATTAACTTCTGCATATCACGTAGGATACGTTGAGAGAAAATAGTCTCGTAG 125
Query 72410 TTTTCACTGGAAACCT-GA-ACTGAAGAAGAGGTGTTTACAGCTTTAAGGTGATTCTGAC 72467
|| ||||| ||||| | || ||| ||| | ||| ||||||||||||||| | ||
Sbjct 126 TTCTCACTAGAAACTTCGATACT--TGAACTTGCGTTCACAGCTTTAAGGTGAGCTTCAC 183
Query 72468 CATGTTCAGTTTCGAATACGCCTTTTTC 72495
||| || ||||| || | ||||||||
Sbjct 184 CATATTTGGTTTCAAACATTCCTTTTTC 211
>seq506238
Length=275
Score = 129 bits (142), Expect = 4e-25
Identities = 133/172 (77%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 110503 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAATCGAACA 110562
||||||||||| | | ||||| | ||||||||| | || | || |||||| || ||
Sbjct 52 GTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATGAGTTAAAACGCACT 111
Query 110563 GCGTAGCCAGAGACACGGATAGTTAATTGAGGGTATTTTTCAGGGTGTTTCTGTGCATC- 110621
||||| || || ||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct 112 GCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGTGTTTAACAGCATCT 171
Query 110622 -CAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCACCTTC 110672
| || | | ||||||| ||||||||| || |||| || |||||||||||
Sbjct 172 TCCAATGTT--TCACGACGTAACACATTCACGTTTAAATGTTGACCACCTTC 221
>seq435060
Length=507
Score = 116 bits (128), Expect = 3e-21
Identities = 322/489 (66%), Gaps = 21/489 (4%)
Strand=Plus/Plus
Query 41138 AATATGAGAAATGAACCTGATAAATACCCTGACTTCCACTCTAACATCGCACACATGGTA 41197
|| |||| | | || ||| || || || ||||||||| |||||| || ||||||||
Sbjct 23 AAGATGAAAGAAGATCCTACCAAGTATCCCGACTTCCACAGTAACATAGCTCACATGGTG 82
Query 41198 TTTAAGCTCCAATGCGAACCTCGTGATGTTAAAAAGTTATTCCCAGCTCTGCGTCAGGCA 41257
||||| || | || | ||| || ||||| || |||||||||| || | |||||
Sbjct 83 TTTAACCTACCTTGTAAGCCTGAGGAAGTTAAGAAACTATTCCCAGCCCTAAGGCAGGCT 142
Query 41258 GCTAAAGCAATCACCTTTGGTATTCTGTATGGTTCTGGCCCAGCTAAAGTAGCTCATTCT 41317
|| || || || || ||||||||||| | ||||| || |||| ||||| |
Sbjct 143 GCGAAGGCGATAACATTTGGTATTCTATTCGGTTCAGGAGCAGCATCTGTAGCAGAGCAA 202
Query 41318 GTTAACGAAGCTCTTTTGGAACAGGCTGCTAAGACAGGCGAACCGTTTGTA--GAATGTA 41375
|||||| |||| | ||| | || ||| ||| | | ||||| || |
Sbjct 203 GTTAACTTAGCTAAGCTAGAATTAGGTG--AAG-CAG-----CTGATTGTACTAAAGAAA 254
Query 41376 TGGTTGCAGATGCTAAAGAGTACATTGAAACGTACTTCGGTCAGTTCCCGCAGCTT-AAG 41434
| | |||| | ||||| ||| ||||||| | |||||| ||| |||
Sbjct 255 TCGCCGCAGGT---------TACATCGAAGTGTACTTCAAGCGGTTCCCTAGACTTAAAG 305
Query 41435 CGTTGGATTGATAAGTGTCACGACCAGATCAAGAATCATGGGTTTATCTATAGTCACTTC 41494
|| ||||||||| ||||| || | ||| | | || ||||| || | ||||||
Sbjct 306 CG-TGGATTGATTCTTGTCATGATGAAATCCGTCAGAAAGGATTTATATACAACCACTTC 364
Query 41495 GGTCGTAAACGTCGTCTGCATAATATCCACTCCGAAGACCGTGGTGTTCAGGGCGAAGAA 41554
|| ||||| ||| | | || || ||| || || | || ||| || | ||||
Sbjct 365 GGCCGTAAGCGTAGATTACACAACATCTCTTCTAGCGATAGAGGCGTTGTAGGTGGAGAA 424
Query 41555 ATTCGTTCTGGATTTAACGCAATCATTCAGTCTGCTTCTTCTGATAGTCTCCTTTTAGGT 41614
|| ||||| |||||||| || ||||| |||||||| || |||||| | || ||||
Sbjct 425 ATCCGTTCAGGATTTAATGCTATCATACAGTCTGCGTCATCTGATCACTTACTGCTAGGA 484
Query 41615 GCTGTAGAT 41623
|||||||||
Sbjct 485 GCTGTAGAT 493
>seq511551
Length=634
Score = 105 bits (116), Expect = 5e-18
Identities = 255/378 (67%), Gaps = 6/378 (2%)
Strand=Plus/Plus
Query 22618 TGCTGTATATGCTACTGAACTTACTGAAAAAGAATGTTATGATGCATTCCAGGCCCTAGA 22677
|||||| ||||| || | | || || ||||| ||||||||| ||||| || ||
Sbjct 13 TGCTGTTTATGCAACGAAGATGACAGAGAAAGAGACTTATGATGCTTTCCAAAGTCTTGA 72
Query 22678 GTATGAGACTAATTCGTTATTTAACTCTAATGGGCAGA-CTCCTTTTGTTACTCTGGGCT 22736
||| || | ||| | ||| | | ||||| || | | |||||||| || | || |
Sbjct 73 GTACGAAATTAACACCTTACACACAGCAAATGGACAAAGCCCCTTTTGT-ACGGTAGGTT 131
Query 22737 TTGGTTTAGG-ACAAGAATGGGAAGAAAGGATGATTCAGAAAGCTATTCTTCAAAATCGT 22795
|||||||||| || | ||||| | | | ||||||||| | || ||| | |||
Sbjct 132 TTGGTTTAGGTACTTGT-TGGGAGTCTAAGCTAATTCAGAAATCCATCCTTGAGGTGCGT 190
Query 22796 CTTAAAGGACTAGGGGCAGCAGGGTCGACACCTATCTTTCCTAAATTGATATTTTCAGTT 22855
||||||| |||| ||| || | |||| | | || ||||| | || | | ||
Sbjct 191 ATTAAAGGCTTAGGTGCATCAAAGAGGACAGCGGTATTCCCTAAGCTTATCCTAACTATT 250
Query 22856 AAGGAGGGGTTAAACAAAAATCCTGGTGATCCTAATTATGATATAAAACAGCTAGCACTA 22915
|| || || | ||| || | | || || || ||| |||| |||||| |||| |||
Sbjct 251 AAAGACGGTGTCAACTTTAAACAGGAAGACCCAAACTATAATATTAAACAGTTAGCTCTA 310
Query 22916 GAATGTTCTGCTACACGTATGTACCCAGACTATT-TAAGCTATGAGAAGGTTGTAGCTGT 22974
|| ||| | || ||||||||||| || |||| | | ||| || ||| |||||| ||
Sbjct 311 GAGTGTGCCAGTAAGCGTATGTACCCTGA-TATTATCAACTACGATAAGATTGTAGAGGT 369
Query 22975 TACTGGCGATTTTAAAGC 22992
|||||| | |||||| ||
Sbjct 370 TACTGGTGGTTTTAAGGC 387
>seq450559
Length=633
Score = 96.9 bits (106), Expect = 2e-15
Identities = 244/361 (68%), Gaps = 14/361 (4%)
Strand=Plus/Plus
Query 22390 CGGTATGTTGAAAAATGGCACTAAAATTGGTAATGCGAATATTGAAACTCCTAAATCCAT 22449
||| ||||| | |||| |||||| |||||||| | || ||| | ||||| || ||
Sbjct 52 CGGCATGTTAACTCATGGTTTTAAAATGGGTAATGCTGAAATAGAACCGCCTAAGTCTAT 111
Query 22450 AACTACTGCGTGTGCGATTACTGCTCAGATTATTGCTCAAGTATCAGGCGCTCAGTATGG 22509
| | ||||| ||| |||| || || ||||||||||| ||| | || | |||||
Sbjct 112 ATCAACTGCCACTGCTGTTACGGCGCAAATTATTGCTCAGGTAGCGAGCCATATTTATGG 171
Query 22510 TGGTACTTCCATTGATCGTATTGATGAAGTTCTAGCTCCGTATGTTAGGAAGTC--CTAC 22567
|||||| | ||| | ||||| || ||||| ||||| || ||| | || || |||
Sbjct 172 TGGTACCACGATTAACCGTATCGACGAAGTGTTAGCTGAGTTTGT--GCAAATCAGTTAC 229
Query 22568 AATAAACATCTGGGGCGTGGC-CTACGTTGGCTTAAGGATGAGAGAAAAGCTGCTGTATA 22626
| || || || |||| || | |||| ||| || || | | | | ||
Sbjct 230 CAAAAGCACCT-TAGCGTCGCTAAAAAATGGC--AAG--TGGCAG--ACGTAGAAGGTTA 282
Query 22627 TGCTACTGA-ACTTACTGAAAAAGAATGTTATGATGCATTCCAGGCCCTAGAGTATGAGA 22685
||| | ||| | || |||||||| ||| |||| ||||||||| | || || |||||
Sbjct 283 TGCCA-TGACGCAAACCGAAAAAGAGTGTCATGACGCATTCCAGTCACTTGAATATGAAG 341
Query 22686 CTAATTCGTTATTTAACTCTAATGGGCAGACTCCTTTTGTTACTCTGGGCTTTGGTTTAG 22745
||| | || || | ||||||| || || || |||||||| | || ||||||||||
Sbjct 342 TGAATACCTTGCATACCGCTAATGGCCAAACACCGTTTGTTACCTTTGGTTTTGGTTTAG 401
Query 22746 G 22746
|
Sbjct 402 G 402
>seq351952
Length=416
Score = 96.9 bits (106), Expect = 2e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 110503 GTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCGTTAAATCGAACA 110562
||||| ||||| | || || || | || |||||| ||| | | ||||||||| ||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 110563 GCGTAGCCAGAGACACGGATAGTTAATTGAGGGTATTTTTCAGGGTGTTTCTGTGCATCC 110622
||||| || || ||||| || |||||||| || || || || || | || | |||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 110623 AAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCACCTTCGAT 110675
|| | | ||||| | | ||||| || |||| ||| ||||||||||| ||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 353834440392692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |