Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031045.1
Length=157855
Score E
Sequences producing significant alignments: (Bits) Value
seq520838 87.8 2e-12
seq451005 84.2 2e-11
>seq520838
Length=421
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/180 (72%), Gaps = 12/180 (7%)
Strand=Plus/Plus
Query 122414 CTTTCATTTTACTACCCAACATTTCAAAAACCTTACGATGTTTATCCAGT---TCCGGCT 122470
|||| |||| || | |||| ||| || || |||||||| | || || ||| |
Sbjct 198 CTTTAGTTTTGCTTGCTAACACTTCGAACACTTTACGATGCTCATTCAACGAATCCA--T 255
Query 122471 TCAGATATTCGTTGTAGAAACCACGAGTACCTTCAGGATTAGCACAGCCTTCAAGAATGA 122530
| ||| | || |||||||| ||||| | | ||| || ||| |||| || || | ||||
Sbjct 256 TAAGA-ACTCATTGTAGAATCCACGCGCAGGTTCTGGGTTAACACAACCCTCTAACATGA 314
Query 122531 AGAACACGTGCTTGTTACC---AGTTTGCTCCCCATCCCAATGGTTTGGTGAATTCAGGA 122587
|||||| ||||||||||| |||||| | || |||||||||||||||| |||| ||
Sbjct 315 AGAACAAATGCTTGTTACCAAGAGTTTGAT---CACCCCAATGGTTTGGTGAGTTCATGA 371
>seq451005
Length=948
Score = 84.2 bits (92), Expect = 2e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand=Plus/Minus
Query 19039 TTGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAA 19098
||| | |||||||||| |||| ||||||| |||||||||||||| ||| ||||||||||
Sbjct 143 TTGCCTCCGTAGCTCAATGGT-AGAGCAGGCGACTCATAATCGACAGGTTGCTGGTTCAA 85
Query 19099 GTCCAGCC 19106
||||||||
Sbjct 84 GTCCAGCC 77
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 501690716074800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |