Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq523693 107 5e-19 >seq523693 Length=695 Score = 107 bits (118), Expect = 5e-19 Identities = 173/243 (71%), Gaps = 13/243 (5%) Strand=Plus/Minus Query 26964 TCCATTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTG-CCTTTGCGCAGGTAT 27022 |||| ||||| || ||| ||||||| | | || |||| ||||| |||||||| Sbjct 329 TCCACTTACGTGTCTGCAATTTACCTTCAAGGTAAAC-TTGCGAACCTTTACGCAGGTAC 271 Query 27023 TCACCAGCGATTTCCGCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCT 27082 ||| | | |||||| || | ||||||||| || || ||||||||||| || || | ||| Sbjct 270 TCAGCCGTGATTTCAGCTAACTTGCCGAACATCACCACGCGGTGCCACTCGGTACGTTCT 211 Query 27083 T-TTGGTTCGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGC 27141 | ||| | ||||| | |||||||| |||| | || |||| | | | |||||| Sbjct 210 TGTTGTTGACCCTGT----TGGTCTTTCCAAGATTCGCTGGTAGCAAGGGTAATATTGGC 155 Query 27142 AACTGC---GCCACCTGACGGCATGTAGCGCACTTCTGGATCGTTGCCTAAATTACCGAT 27198 || || |||| | ||||| || |||||||| ||||| | ||||||||| |||| Sbjct 154 CACGGCATTGCCATTT---GGCATATAACGCACTTCGGGATCTTGGCCTAAATTGCCGAC 98 Query 27199 TAA 27201 ||| Sbjct 97 TAA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133179695097120