Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031062.1
Length=75147
Score E
Sequences producing significant alignments: (Bits) Value
seq400345 123 1e-23
seq512587 122 4e-23
seq184512 109 3e-19
seq500342 105 3e-18
seq523657 104 1e-17
seq516110 100 1e-16
seq501051 93.3 2e-14
>seq400345
Length=893
Score = 123 bits (136), Expect = 1e-23
Identities = 210/302 (70%), Gaps = 12/302 (4%)
Strand=Plus/Minus
Query 60981 CACCTGCATACAGAACAGTACCAGCAGCAGCCAGCAGGTCTTTTTGCAGAACAGCTTCGG 61040
|||| |||| ||||| ||||||||| |||| || |||||| | || ||||||
Sbjct 366 CACCACCATAACGAACAACACCAGCAGCGTTAAGCAAATCAATTTGCAAAGCATCTTCGG 307
Query 61041 TCATCTGTACAGCACCGTTCATCAGCTC--GGTAGA----CAGGTGATCCATCAGGCCAT 61094
| || | |||||| | |||| || ||| || || || | |||||
Sbjct 306 TGATTTCATTAGCACCCATGATCATTTCACGGTTGATGTGCATTTG-TAAATCAG----- 253
Query 61095 CATCAGAGTCGAAGTCCATAGACTCTTGAGTGAACTCATGGAAGAAACCGAACTTGTGAA 61154
|||||| ||| ||||| | |||||||| || | |||| ||||||||| || || | |
Sbjct 252 CATCAGTGTCAAAGTCTAACGACTCTTGGTTGTATTCATCGAAGAAACCAAATTTCTCTA 193
Query 61155 TTGAGCCTTCACGTTCCAGACGGGTGAAGCCAACACGGTTAACACGACCACCATTTTCGG 61214
||||||||| |||| | ||| ||| ||||| ||||||||||||||||| |||||
Sbjct 192 ATGAGCCTTCCAGTTCAATACGACGGAAACCAACGCGGTTAACACGACCACCGTTTTCAC 133
Query 61215 TCAGCAGTGGCAGCTTGTTGGTGATAGTACCAATGTCTTTACTGGAGCCATACAGGTTCC 61274
| || | || ||||| | || ||||||| |||||| || || ||||| | ||| |
Sbjct 132 TTAGTACAGGTAGCTTAGACGAAATCGTACCAACGTCTTTGCTTGAACCATATAAGTTAC 73
Query 61275 CA 61276
||
Sbjct 72 CA 71
>seq512587
Length=355
Score = 122 bits (134), Expect = 4e-23
Identities = 226/328 (69%), Gaps = 3/328 (1%)
Strand=Plus/Plus
Query 30961 TGATGGTTGGCATTATCTGTTCGGTAACTTCAA-CCTCGGTGGAACGTTATCCGGGCGGT 31019
||||||| | |||||| ||||||||||| ||| ||||| || || || |
Sbjct 29 TGATGGTGTGTGGTATCTGCATGGTAACTTCAAACCTTGGTGGTACTGTAAGTGGAAGAC 88
Query 31020 TAAGCTCATCCGATCCAAACCTGCAAAACCTACC-AGCGAAAGAGAATAAATACTCCAAG 31078
| || ||||| | || ||| | |||||| |||| ||| | | | | ||| | |||
Sbjct 89 TGAGTTCATCAGGACCCAACTTACAAAACTTACCTAGC-AGCGGCACCATATATGCTAAG 147
Query 31079 CTGATCAAGTCTTGCTTCCAAGCTCCACCGGGTTGGATGTTCTGTGGTCTGGACTTTGCA 31138
| || ||| ||| || | || || |||||||| | ||| |||||| ||
Sbjct 148 CATATTAAGCGTTGTTTTAAGGCACCTAAAGGTTGGATATGGGCTGGCGCAGACTTTTCA 207
Query 31139 AGTCTGGAAGACAGGATCTCTGCTGTTACCACTAAAGACCCAAATAAACTGAAGGTGTAT 31198
| | ||||| || || || ||| | || ||| || |||||||| || ||||||||
Sbjct 208 TCTTTAGAAGATAGAATTTCAGCTCTAACAACTCGTGATCCAAATAAGCTAAAGGTGTAC 267
Query 31199 ACCGATGGTTATGACGGTCACTGTCTTCGTGCTTATGCTTACTTTGGTGAGCAGATGCCA 31258
|||||||||||||| ||||||||||| || || ||| ||||||| || | |||||||
Sbjct 268 ACCGATGGTTATGATGGTCACTGTCTACGAGCCTATTCTTACTTCGGGCATATGATGCCA 327
Query 31259 GACATTGTGGATACTGTAGAGTCCATCA 31286
|| ||| | ||||| | || || ||||
Sbjct 328 GATATTATTGATACCATTGATTCAATCA 355
>seq184512
Length=2755
Score = 109 bits (120), Expect = 3e-19
Identities = 207/298 (69%), Gaps = 5/298 (2%)
Strand=Plus/Plus
Query 61092 CATCATCAGAGTCGAAGTCCAT-AGACTCTTGAGTGAACTCATGGAAGAAACCGAACTTG 61150
|| |||||||||| |||| ||| ||| |||| || | ||| || | ||| |||||
Sbjct 819 CAGCATCAGAGTCAAAGTTCATTAGA-TCTTTAGACCATTCAGTAAACATACCAAACTTC 877
Query 61151 TGAATTGAGCCTTCACGTTCCAGACGGGTGAAGCCAACACGGTTAACACGACCACCATTT 61210
| || | |||||| || ||| |||| |||||||||||||||||||||||| ||
Sbjct 878 TCAAACGTACCTTCAATCTCTTTACGTTTGAAACCAACACGGTTAACACGACCACCAGTT 937
Query 61211 TCGGTCAGCAGTGGCAGCTTGTTGGTGATAGTACCAATGTCTTTACTGGAGCCATACAGG 61270
|| || | || || || | || ||||||||||||| | || || | |
Sbjct 938 TCACCAAGTAAAGGAAGTTTACCTGGAATCAAACCAATGTCTTTAGAGCTACCGTATAAG 997
Query 61271 TTCCCATTAGCAATGGTCA-CACCAGAAGCATCGATGCCCTGATCGTTAATGTTACGGTC 61329
|| |||||| | | | ||| | || | ||||| || |||||||||||||||||| |||
Sbjct 998 TTACCATTAACTA-GTTCAGCGCCTGCTGCATCAATACCCTGATCGTTAATGTTAGCGTC 1056
Query 61330 GTCCAGCAGTGGTACGTATTCGTACACTTTGATGGTTTTACCGTAGTTCTTCGGCATG 61387
|| |||| |||| || | |||| || || | |||| ||||||| ||||||
Sbjct 1057 ATCTAGCA-AGGTAGATAATGGTACTGCTTAATTACTGTACCTGAGTTCTTAGGCATG 1113
Score = 102 bits (112), Expect = 4e-17
Identities = 143/200 (72%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 60336 CAAGACGTTCTGCACGCTTAACCAGAATACCGTAGTACCACTTGATGGAGCTGAAACCAG 60395
||| ||| |||| ||| | ||| || ||||| |||| ||||| ||||| || ||
Sbjct 117 CAATACGCTCTGTACGTAGACCCATAAAGCCGTACCACCATTTGATAGAGCTAAAGCCCA 176
Query 60396 TCTCACCGTATGGATCGTTACGGTCAGCAGTTTCTTTACCCGGCATCTTGGTCATGATGG 60455
|||| || || ||||||||||||||||||||||| |||| ||| | || | |
Sbjct 177 TCTCGCCATAAGGATCGTTACGGTCAGCAGTTTCAGTACCTGGCTTACGTGTAACAGTTT 236
Query 60456 TGAAGTTCACAGTCTTACCGTTGGTCTGGAAACCAATGGTAGAGAATGCGTCATCACCAA 60515
|| || || |||||||| || ||||||||||| |||| |||| |||||||| |
Sbjct 237 CAAACTTATTAGACTTACCGTCAGTTTGGAAACCAATAGTAGTAAATGATTCATCACCTA 296
Query 60516 CAACCAGCATTGG--ATACA 60533
||| || | ||| |||||
Sbjct 297 CAATAAGAAGTGGGAATACA 316
>seq500342
Length=215
Score = 105 bits (116), Expect = 3e-18
Identities = 128/172 (74%), Gaps = 2/172 (1%)
Strand=Plus/Plus
Query 65131 TTGAACAGCTTGTTTGAACCAAGGAAGGGTTCGGTCAGAGCTGAGTAACGCCATTCTGCC 65190
||| | | |||||| ||||||||||| || || ||| || ||||||||||| ||
Sbjct 21 TTGCAGATCTTGTTGGAACCAAGGAAAGGCTCACTCAATGCAGAGTAACGCCACTCGTTG 80
Query 65191 TGACGACGAATCAGCTTAGGCTGAACACTGGAACGACCTTTCACCTTTTTAGGCTTGGCC 65250
| |||||||||||||||||| |||| |||||||| || ||||||||||| ||
Sbjct 81 TTACGACGAATCAGCTTAGGGGCAACAGACGAACGACCCTTAACCTTTTTAGGTTTCTGG 140
Query 65251 TTACCAGTCACATTCATC-AGGTCATTCCACTCATTGATCTTACCGATCTGA 65301
|||| || |||| | || || ||||||| | ||||||| ||||||||
Sbjct 141 GAGCCAGAGAC-TTCAACGAGTTCTTTCCACTTGTCGATCTTAGCGATCTGA 191
>seq523657
Length=447
Score = 104 bits (114), Expect = 1e-17
Identities = 86/104 (83%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 61103 TCGAAGTCCATAGACTCTTGAGTGAACTCATGGAAGAAACCGAACTTGTGAATTGAGCCT 61162
|| ||||||| ||||||||||||| | |||| ||||||||||||||| | ||||| |||
Sbjct 104 TCAAAGTCCAAAGACTCTTGAGTGTATTCATCGAAGAAACCGAACTTCTCCATTGAACCT 45
Query 61163 TCACGTTCCAGACGGGTGAAGCCAACACGGTTAACACG-ACCAC 61205
||| |||| | ||| |||| || || ||||||||||| |||||
Sbjct 44 TCAAGTTCTAAACGCTTGAAACCGACTCGGTTAACACGAACCAC 1
>seq516110
Length=283
Score = 100 bits (110), Expect = 1e-16
Identities = 122/164 (74%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 61181 AAGCCAACACGGTTAACACGACCACCATTTTCGGTCAGCAGTGGCAGCTTGTTGGTGATA 61240
|||||||||||||||||||||||||| |||| | || |||| ||| | ||||
Sbjct 255 AAGCCAACACGGTTAACACGACCACCTGTTTCTGATAGAGCAGGCATCTTAGCAGGGATA 196
Query 61241 GTACCAATGTCTTTACTGGAGCCATACAGGTTCCCATTAGCAATGGTCA-CACCAGAAGC 61299
| |||||| || ||||| ||||| || ||||| || || | | ||| |||||| ||
Sbjct 195 GAACCAATATCCTTACTTGAGCCGTATAGGTTACCGTTTACGGT-TTCAGCACCAGTGGC 137
Query 61300 ATCGATGCCCTGATCGTTAATGTTACGGTCGTCCAGCAGTGGTA 61343
||| | ||||||||||||||| || || |||| |||||||
Sbjct 136 ATCCAAGCCCTGATCGTTAATATTGGCATCATCCAATAGTGGTA 93
>seq501051
Length=457
Score = 93.3 bits (102), Expect = 2e-14
Identities = 168/246 (68%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 36318 CTACATGAAGTTAGCCAAGTATATCGCTGCTGTTGATGGCGATGTAACTCATGCTGACTT 36377
|||| | || ||||| |||||||| ||| | || ||| || || |||||| ||||||
Sbjct 327 CTACGTTAAATTAGCTAAGTATATTGCTACAGTACGTGGGGAAGTCTCTCATGTTGACTT 268
Query 36378 GAATGAGGCATTGCCGTTCTATAAGTCTGGTCAGGCAGCTCGTAATGAGATCATGACCAT 36437
| ||||| || || ||||| || || | |||| |||| | | | | |
Sbjct 267 GGTTGAGGACTTACCTTTCTACAAAGGCAGTGAATCAGCCAAACGTGAGTTACTTAACTT 208
Query 36438 GGCTACGGCGTGGGGCTATAAGAAGCACATCATCATTAAGAAGAAGTTCGATAGTGGTAT 36497
|||| |||| ||||||||||| |||| ||||||||||| || || ||||||
Sbjct 207 AGCTATTGCGTATGGCTATAAGAATAACATTATCATTAAGAAATTATTTAATGATGGTAT 148
Query 36498 CGAGTTCTTCCAAGGTGAGACGCTGAAAGAAACTGATCTGGATAAGATCCGTGTCTCTTA 36557
|||||||| | |||||||| || |||| ||||| | || || || | | ||| |
Sbjct 147 TGAGTTCTTACGTGGTGAGACACTTCAAGAGTCTGATATAGAAAACATGTCTATGTCTCA 88
Query 36558 TAGCGA 36563
||| ||
Sbjct 87 TAGTGA 82
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 238806293235576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |