Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031063.1
Length=72697
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 354 4e-93
seq488807 205 4e-48
seq255804 187 1e-42
seq523594 87.8 8e-13
seq469180 82.4 4e-11
>seq486019
Length=823
Score = 354 bits (392), Expect = 4e-93
Identities = 577/824 (70%), Gaps = 5/824 (1%)
Strand=Plus/Plus
Query 67852 CATCCACCCACAGCCAGTCTTCGTTGTGGGAGTAAGCCCAGACACTGATCACACTGAAGT 67911
|||| ||||| | ||| || | |||| ||||||||| ||| | |||||||| |
Sbjct 1 CATCAACCCAGAACCAATCACCATTGTTATTGTAAGCCCACACAGATAAAACACTGAAAT 60
Query 67912 CACTCGCCTTCTTCGCAGAGGTAGCGAAGTCAGTGGTGATGTAGAAGTTGTACCGCTTCT 67971
| | |||| || || || |||||||| || || ||||||||| || |
Sbjct 61 CCGCAGAGGTCTTTTCACTAGTTGCAAAGTCAGTTGTTATATAGAAGTTGAACTTACCTT 120
Query 67972 TGTTGTCCAGTACGTTGCGCC-GCATGTACCAAGCCACCTCACCATCCTGGATGAGACGG 68030
| || | | ||| || | | ||||||| | |||| ||| || || |||||
Sbjct 121 TATTTTTTAATACAA-GCTCATGTCTGTACCAGTTAATATCACAATCTTGAATTAGACGA 179
Query 68031 TCTTCGTCGGACATGATCTGGAGCATAAGCTCTTGGTTGAATGTCTCGATCTTCCCTGCC 68090
|| ||||| |||||||| | | ||||||||||||||| ||||| || | ||| ||||||
Sbjct 180 TCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTAAATGTATCCACCTTACCTGCC 239
Query 68091 TTCTTGGCCAGGGTGTACTTCTGCAACACGAAGTCGTAGGTGAATCGGTCAGCCCATGCA 68150
|| || ||||| || | || || || | || | ||| || |||| ||| |||
Sbjct 240 TTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATATGAGAAACGATCAGGCCACGCA 299
Query 68151 CCCTTGAACTCTTCCCGTGAGCACGGGAATCTCTCGCACACAGGGTAGACGTTGACCTTC 68210
|| | || |||| | | || || || | | ||||||||||| ||||| || |
Sbjct 300 CCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACACACAGGGTACACGTTAACTGCC 359
Query 68211 CAGGCACCAGACTCCACTGCTTTGTACAGTGGATCCTTCGCGTTGAACGGTGTACCCGAC 68270
|| ||||||||||| ||||||||||| | |||||| || ||| || || ||||| |||
Sbjct 360 CAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGCGAGTTAAAGGGAGTACCTGAC 419
Query 68271 CAGATGATCAT-GTTCTTCTTCGGGTGCAGTGCGTAGTCCACTGCCTTGTACACCGTGTC 68329
||||| | | | | | | || |||| | ||||||||| | ||||||||||| || ||
Sbjct 420 CAGATTACCTTAGAGCGTATT-GGGTCTAATGCGTAGTCAATAGCCTTGTACACTGTATC 478
Query 68330 TTCGATGGCTGCGATGACGGTTGGTGAGCGAGCATCTTCGTCCGAAACCAAGTCATCCAG 68389
||| | || | || || || | ||| | |||||||| ||||| | |||||||| ||
Sbjct 479 TTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTCATCCGATATTAAGTCATCTAG 538
Query 68390 TACCGCAAGCTGCGGACGCTTACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 68449
||| |||||| ||||| ||||||||| || |||||||| ||||| ||||| || ||
Sbjct 539 TACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACCACGTACACCGGTCTTTGCGCC 598
Query 68450 GTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGTGAACTTCCAGCGGATATCAGT 68509
|| || || ||||| || || || || | ||| | || | |||||| ||||||||
Sbjct 599 ATAACCTTTTACGATAAATCGGTTACCATCAATGTTATTAAATTCCCAGCGTATATCAGT 658
Query 68510 GAAGTTGGTTTGAGGGATGTACTTCTTCAGGAACTCAGAGTTCTCCCAGCGGAACTCCAG 68569
||| | || | ||| | ||||| | || || ||||| ||||| ||||||||||
Sbjct 659 GAACCTAGTGT-AGGTACATACTTAAGTAAAAATTCTGAGTTTTCCCAACGGAACTCCAA 717
Query 68570 GTTCTTACGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACGTACAGAGCAAGGTC 68629
|||||||||||||||||| |||||||| || || || || || |||||||| | |
Sbjct 718 GTTCTTACGCATGTTCTTAACACCGTTCTCTATACTATCTGAAACATACAGAGCCAAGGG 777
Query 68630 TACCTTACCGAAACCAGGAAGCTCACCGTACAGTGCAATGTACA 68673
|| ||||| || || || | |||||||| || |||||||
Sbjct 778 AACTTTACCAAACCCGGGGATGTCACCGTAACAAGCTATGTACA 821
>seq488807
Length=774
Score = 205 bits (226), Expect = 4e-48
Identities = 314/444 (71%), Gaps = 8/444 (2%)
Strand=Plus/Minus
Query 67887 GCCCAGACACTGATCACACTGAAGTCACTCGCCTTCTTCGCAGAGGTAGCGAAGTCAGTG 67946
||||| ||| || || || ||||| || |||| || ||||||| || || || ||
Sbjct 440 GCCCATACAGATATTACGCTAAAGTCGCTAGCCTCTTTTTCAGAGGTTGCAAAATCCGTA 381
Query 67947 GTGATGTAGAAGTTGTACCGCTTCTTG----TTGTCCAGTACGTTGCGCCGCATGTACCA 68002
|||||||||||||||||| || |||| || ||| | || || || ||||||
Sbjct 380 GTGATGTAGAAGTTGTAC-GCGTCTTTACTCTTAAGAAGTGCATTACGT-GC--GTACCA 325
Query 68003 AGCCACCTCACCATCCTGGATGAGACGGTCTTCGTCGGACATGATCTGGAGCATAAGCTC 68062
| | ||||| ||| | || | | |||||| || ||||| || ||||| | |||
Sbjct 324 ATTAATCTCACTATCTTTAATTAATCTGTCTTCTTCTGACATAATTCTTAGCATCAACTC 265
Query 68063 TTGGTTGAATGTCTCGATCTTCCCTGCCTTCTTGGCCAGGGTGTACTTCTGCAACACGAA 68122
|||||| || | || | ||| ||||| || || |||||| | || || || |
Sbjct 264 TTGGTTAAAAGAATCCACCTTACCTGCTTTAACAGCTTTGGTGTATTGCTTCATTACATA 205
Query 68123 GTCGTAGGTGAATCGGTCAGCCCATGCACCCTTGAACTCTTCCCGTGAGCACGGGAATCT 68182
||| || ||||| || |||| ||||| || ||||||||||| | | || || ||| |
Sbjct 204 GTCATACGTGAAGCGATCAGGCCATGAGCCTTTGAACTCTTCTCTCGTACAAGGAAATTT 145
Query 68183 CTCGCACACAGGGTAGACGTTGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGTGG 68242
||| ||||||||||| || || || | ||| || || ||||| ||||||||||||| |||
Sbjct 144 CTCACACACAGGGTACACATTTACGTACCAAGCTCCTGACTCAACTGCTTTGTACAATGG 85
Query 68243 ATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGC 68302
|| ||||| ||||| ||||| |||||||| || | ||| | || |||| |||
Sbjct 84 GTCACGGGCGTTAAACGGAGTACCTGACCAGATTATTTTAGACTTGGTAGGATGCAATGC 25
Query 68303 GTAGTCCACTGCCTTGTACACCGT 68326
||| |||||||| || || || ||
Sbjct 24 GTAATCCACTGCTTTATAAACTGT 1
>seq255804
Length=3791
Score = 187 bits (206), Expect = 1e-42
Identities = 476/719 (66%), Gaps = 13/719 (2%)
Strand=Plus/Plus
Query 68143 CCCATGCACCCTTGAACTCTTCCCGTGAGCACGGGAATCTCTCGCACACAGGGTAGACGT 68202
||||||| || || |||||||| | | || || || |||| || | ||| || ||
Sbjct 2268 CCCATGCTCCTTTAAACTCTTCTCTAGTACAAGGAAACTTCTCACATATAGGATATACAC 2327
Query 68203 TGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGTGGATCCTTCGCGTTGAACGGTG 68262
| || | ||| |||||||| |||| |||| |||| ||||| || || || || || |
Sbjct 2328 TTACATCCCATGCACCAGATTCCATAGCTTCATACAAAGGATCATTAGCATTAAAGGGAG 2387
Query 68263 TACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGCGTAGTCCACTGCCTTGTACA 68322
|||| ||| || || | |||||| ||||| ||||| || | | |||| |
Sbjct 2388 TACCAAGCCATATAGTCTTAGACTTCTTAGGGTGAAGTGCATACTTAATAGCCTGACCTA 2447
Query 68323 CCGTGTCTTCGATGGCTGCGATGACGGTTGGTGAGCGAGCATCTTCGTCCGAAACCAAGT 68382
| ||||||| || ||| || || || ||||| || | || || | ||| ||||
Sbjct 2448 CTGTGTCTTTAATAGCTTGAATAACTGTAGGTGAACGTGAGTCATCATTACTAACTAAGT 2507
Query 68383 CATCCAGTACCGCAAGCTGCGGACGCTTACCCATCTCCTTCGCACCACGGACACCAGTCT 68442
|||| || | || | ||| || || |||||||||||||| ||||||| | ||| ||||
Sbjct 2508 CATCTAGGATAGCCATCTGTGGGCGTGTACCCATCTCCTTCACACCACGAATACCTGTCT 2567
Query 68443 TGGCACCGTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGTGAACTTCCAGCGGA 68502
||||||| || ||||| || | ||| | || | | ||| | |||| ||| | |
Sbjct 2568 TGGCACCATACCCCTTTACTACGAATTTAGTACCATTAATATTCTTAAACTCCCACCTAA 2627
Query 68503 TATCAGTGAAGTT------GGTTTGAGGGATGTACTTCTTCAGGAACTCAGAGTTCTCCC 68556
|||| |||| || || ||| | ||||||| | ||||||| ||||||
Sbjct 2628 TATCTGTGAGCTTTAATCCTTCTTTAGGTAGATACTTCTGTAAGAACTCACTACTCTCCC 2687
Query 68557 AGCGGAACTCCAGGTTCTTACGCATGTTCTTCACACCGTTGTCGATGGAGTCCGACACGT 68616
| || |||| | |||||| | ||| ||| | |||||| || || || || || |
Sbjct 2688 AACGAGACTCTAAGTTCTTTCTCATTGACTTAATACCGTTATCAATACTATCTGATACAT 2747
Query 68617 ACAGAGCAAGGTCTACCTTACCGAAACCAGGAAGCTCACCGTACAGTGC-AATGTACAGG 68675
|||| | | | |||||||| || || | ||||||| || || || | |
Sbjct 2748 ACAGCACTAATTTAACCTTACCAAAGGACGGCATTCTGCCGTACACCGCTAAGATATAAG 2807
Query 68676 AACAGGTACTCACCCATCACGGTAGTCTTGGCCGCACCACGGAACACCATGTTGGCGATC 68735
| ||||||||| |||| | |||||||| | |||||||| || | |||||| || |
Sbjct 2808 ATAAGGTACTCAGCCATTAGTGTAGTCTTACCTGCACCACGAAAGATCATGTTAGC--TA 2865
Query 68736 CGAGTCT--GGCCAGAGCCAATCTGGTCAAGCATCCGTAGGTGAAGCACTGGTGTCTTGT 68793
|| ||| ||| | | || || | |||| || ||||| || |||| ||
Sbjct 2866 CGTTTCTTAATCCACCATCTAACTTATCTAACATCTTTAAGTGAATAACAGGTGATACGT 2925
Query 68794 TCTCTTCCCCTTCGTTACCGTTGACCATCTTGATGAA-GTCAACGAACTGCAAGGCAAA 68851
|||| || || || ||| || || | ||| || || ||||| ||||| ||| |||||
Sbjct 2926 TCTCCTCACCCTCACCACCATTAACTAGCTTAATAAACGTCAA-GAACTCCAATGCAAA 2983
>seq523594
Length=514
Score = 87.8 bits (96), Expect = 8e-13
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 34298 ATCCAAAAGCGATCTACGTTGAAGCCAGCTTCGACAGTGCGTCCGTCATTGTACACACCA 34357
||||| ||||| || |||| ||| || ||||| |||||||| || || |||||||||||
Sbjct 512 ATCCAGAAGCGGTCCACGTCGAAACCGGCTTCTACAGTGCGACCATCGTTGTACACACCG 453
Query 34358 AAGCCACCAACCAAACCATTCAC 34380
|| ||||||| ||||||||| ||
Sbjct 452 AAACCACCAATCAAACCATTGAC 430
>seq469180
Length=838
Score = 82.4 bits (90), Expect = 4e-11
Identities = 255/391 (65%), Gaps = 3/391 (1%)
Strand=Plus/Minus
Query 64141 AGCTTCAAATCGAAGTTGCCAGCAAGGTCATCCCTGCGGATGTCCACGAAGTGCTCATTC 64200
||||| | ||| ||||| |||||||||||||| | || ||||| | || |
Sbjct 404 AGCTTAACATCAAAGTTACCAGCAAGGTCATCACGTTTAATAGTAACGAACTCTTCGTCA 345
Query 64201 GTGATCCTCACCACTTCCACATCGTCCAGGAACTCAGCGTTCATGGCTATGATCTTCCGC 64260
|| || | | ||||| | || || | |||| |||||||| ||| ||||| ||
Sbjct 344 GTAATTCGTATAACTTCTTCTTCTTCTAAGAACAAGGCGTTCATACTTATAATCTTACGG 285
Query 64261 CCGATCTCGATGATGCCAGCCGAGAGACGGCGAAGGATTCCAAGCTCACGCTTCGATGCA 64320
|| ||||| ||||| || | | || | ||| || | |||||| || || |||
Sbjct 284 CCAATCTCTTCAATGCCTGCACCTAT-CTACGTAAGATACCTATCTCACGTTTAGAAGCA 226
Query 64321 GCATCCAATGCACCACGTACAGCAGTAGCGGTGTCACCGAGTGCAGCACCAGAGATGCCA 64380
| |||| ||||||||| || | | | || ||||| | |||| ||||| | |||
Sbjct 225 GAGTCCATTGCACCACGAGCATTACCAACAGTATCACCAAATGCATCACCACTTACACCA 166
Query 64381 GCGTTGAAAGCCTTCACACCAGTCATGGATTCAGCTTCTGCCTGTTGCAGGTTGATCATG 64440
| | || || || | ||| || | ||||||||||| ||||||| | | |||
Sbjct 165 GTACTAAATGCTTTGATACCTGTTAATGATTCAGCTTCATTGTGTTGCATACTAAGCAT- 107
Query 64441 TAC-TGAGCGGACTGCGGGATCTCTGGGAAGGTGTGCATGTGCACAGCAGCCCGTGGGTC 64499
||| |||| ||||| | | ||| || | | ||||||| | || | ||| ||
Sbjct 106 TACAGGAGCTGACTGTGAAAGCTCAGGATACTTATGCATGTAAAATGCTTTACTTGGATC 47
Query 64500 TGCACCTGGGTTGAACTCGTAGTTCTCACCC 64530
|||| |||| ||||||||| ||||||
Sbjct 46 AACACCACCGTTGTACTCGTAGTCATCACCC 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 231016504951676
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