Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq449735 181 1e-40 >seq449735 Length=3187 Score = 181 bits (200), Expect = 1e-40 Identities = 509/758 (67%), Gaps = 40/758 (5%) Strand=Plus/Minus Query 132250 ccAACGTCTTTGGTCGGTAAAGCAATTTCTAAACAAAGATTACTCTGTTTAATTGGCGAT 132309 |||||| ||| | | ||||| |||||||||||||| | |||| || ||| || | Sbjct 763 CCAACGGCTTAGTT-GGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCC 705 Query 132310 G-TTTCGCGAATGAACGGAGTATAGCGGTTCATATTATCAGTG---AACGCT--GGA--T 132361 ||| || ||||||||| || || | ||||| ||||| |||| | | | | Sbjct 704 ACTTTAGC-AATGAACGG------GCTGTGCGTATTA-CAGTGGTCAACGTTTTGTAAGT 653 Query 132362 ACACTCGAGCCGTGCCAGAACGTTCTGTCATAAACAATTCAAACAATTCAAGAGCTTTGA 132421 | | ||| | || | | ||||||| | ||||| | |||| ||||| |||||| | Sbjct 652 AAATACGACCGGTACTTGCACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAA 593 Query 132422 TGCGTTTCTTGCGAATA-ATTGGAtttttttCTAGTTCTTCATATAATTCGCGG--AATT 132478 ||||||| || ||||| ||| | | || ||| || || | |||| |||| || | Sbjct 592 TGCGTTTTTTACGAATTGATTCG-TCTTGTTC--GTATTTTACATAAAGCGCGTCAAACT 536 Query 132479 TATCTTCATCCCGGAAATAAGAATCGAACAATTCGCCATTAGCTACATCTG---GGCTGA 132535 |||| || ||| | | |||| | | ||| | || ||||| | |||| | Sbjct 535 CGTCTTGGTCTTCAAAAAATGCATCGTAAAG---GCC--TGGC-ACATCAGAGGGGCTAA 482 Query 132536 ACAGTGTTATGTACCCATTTTTACCAAGACGTTCCATCATCAAATCATTGATTTGCAGAC 132595 ||| || ||||| | | |||| | ||| ||| | | ||| | || | | Sbjct 481 ACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGC 422 Query 132596 CATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTTAATACAAGCA 132655 | ||||||| |||||| | ||||| ||||| || || ||| || || | ||| | || Sbjct 421 CGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACA 362 Query 132656 GGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGTACAC 132715 ||||||| ||||||| |||||| | || || | | || ||||| || |||||||||| Sbjct 361 GGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACAC 302 Query 132716 CGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAAAGGAATTACGCCAG 132775 ||||||| ||||| ||| || || || ||||| || || |||||||||| || | Sbjct 301 CGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCG 242 Query 132776 TATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTGA 132835 |||| | |||||||||| | ||| | || || ||||| ||| ||||| | Sbjct 241 TATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAA 182 Query 132836 TGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAATACTG-TTAC-TTGCCGCATTA 132891 |||| || || || || |||| |||| || |||| ||| || || | || ||| Sbjct 181 TGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAAT--TGCAGACGAGGTGGCGTTA 126 Query 132892 ATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTAAATTGACGAGTAGGA 132951 || |||| || |||||| || || | |||||| || ||||| || || || || Sbjct 125 ATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGC 66 Query 132952 GTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAAT 132989 |||||| | || ||||||||||| ||||||| |||||| Sbjct 65 GTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 508121792452960