Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031065.1
Length=159878
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 181 1e-40
>seq449735
Length=3187
Score = 181 bits (200), Expect = 1e-40
Identities = 509/758 (67%), Gaps = 40/758 (5%)
Strand=Plus/Minus
Query 132250 ccAACGTCTTTGGTCGGTAAAGCAATTTCTAAACAAAGATTACTCTGTTTAATTGGCGAT 132309
|||||| ||| | | ||||| |||||||||||||| | |||| || ||| || |
Sbjct 763 CCAACGGCTTAGTT-GGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCC 705
Query 132310 G-TTTCGCGAATGAACGGAGTATAGCGGTTCATATTATCAGTG---AACGCT--GGA--T 132361
||| || ||||||||| || || | ||||| ||||| |||| | | | |
Sbjct 704 ACTTTAGC-AATGAACGG------GCTGTGCGTATTA-CAGTGGTCAACGTTTTGTAAGT 653
Query 132362 ACACTCGAGCCGTGCCAGAACGTTCTGTCATAAACAATTCAAACAATTCAAGAGCTTTGA 132421
| | ||| | || | | ||||||| | ||||| | |||| ||||| |||||| |
Sbjct 652 AAATACGACCGGTACTTGCACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAA 593
Query 132422 TGCGTTTCTTGCGAATA-ATTGGAtttttttCTAGTTCTTCATATAATTCGCGG--AATT 132478
||||||| || ||||| ||| | | || ||| || || | |||| |||| || |
Sbjct 592 TGCGTTTTTTACGAATTGATTCG-TCTTGTTC--GTATTTTACATAAAGCGCGTCAAACT 536
Query 132479 TATCTTCATCCCGGAAATAAGAATCGAACAATTCGCCATTAGCTACATCTG---GGCTGA 132535
|||| || ||| | | |||| | | ||| | || ||||| | |||| |
Sbjct 535 CGTCTTGGTCTTCAAAAAATGCATCGTAAAG---GCC--TGGC-ACATCAGAGGGGCTAA 482
Query 132536 ACAGTGTTATGTACCCATTTTTACCAAGACGTTCCATCATCAAATCATTGATTTGCAGAC 132595
||| || ||||| | | |||| | ||| ||| | | ||| | || | |
Sbjct 481 ACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGC 422
Query 132596 CATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTTAATACAAGCA 132655
| ||||||| |||||| | ||||| ||||| || || ||| || || | ||| | ||
Sbjct 421 CGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACA 362
Query 132656 GGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGTACAC 132715
||||||| ||||||| |||||| | || || | | || ||||| || ||||||||||
Sbjct 361 GGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCCACGTACAC 302
Query 132716 CGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAAAGGAATTACGCCAG 132775
||||||| ||||| ||| || || || ||||| || || |||||||||| || |
Sbjct 301 CGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCG 242
Query 132776 TATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTGA 132835
|||| | |||||||||| | ||| | || || ||||| ||| ||||| |
Sbjct 241 TATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAA 182
Query 132836 TGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAATACTG-TTAC-TTGCCGCATTA 132891
|||| || || || || |||| |||| || |||| ||| || || | || |||
Sbjct 181 TGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAAT--TGCAGACGAGGTGGCGTTA 126
Query 132892 ATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTAAATTGACGAGTAGGA 132951
|| |||| || |||||| || || | |||||| || ||||| || || || ||
Sbjct 125 ATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGC 66
Query 132952 GTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAAT 132989
|||||| | || ||||||||||| ||||||| ||||||
Sbjct 65 GTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 508121792452960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |