Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031078.1
Length=50082
Score E
Sequences producing significant alignments: (Bits) Value
seq498792 109 2e-19
seq471061 80.6 8e-11
>seq498792
Length=554
Score = 109 bits (120), Expect = 2e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 40186 GCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGT 40245
|||| || || || || ||||| ||||| |||||||| | || ||| | ||||
Sbjct 1 GCATCGATACCCGTTCCGGGTTAAGGAATCGCTCGAACAGCAGGTCGTATTCCAGAGGGT 60
Query 40246 CCAGGTCTGTGATGCCGAGGCAG-TAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCG 40304
| ||||| || || | ||| ||||| |||||||| |||||| |||| ||||| ||
Sbjct 61 CAAGGTCAGTAAT-CTTTTGCACATAGGCCACCAGCGACCCGGCACCCGAACCACGGCCA 119
Query 40305 GGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAG 40364
|| || || |||||||| ||||||||| ||| ||||| |||| |||||||
Sbjct 120 GGACCTACTGGTACGCCGTTACTCTTGGCCCACTGGATAAAGTCCATCACGATCAGGAAG 179
Query 40365 TAGGACGGGAACCCCAGCTGGATGATCATGTCGATCTCG 40403
|| ||||||||||| |||||| || || || | ||||
Sbjct 180 TAACCCGGGAACCCCATCTGGATAATGATATCCAGCTCG 218
>seq471061
Length=546
Score = 80.6 bits (88), Expect = 8e-11
Identities = 139/201 (69%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 40167 AAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCT-CGAAGAT 40225
||||| || || | |||||||||||||| ||||| ||||| | || |||| | || |
Sbjct 60 AAGTCAATATCGAAATCGGGCATGGACACACGCTCAGGGTTTAAAAAGCGCTACAAATAA 119
Query 40226 GAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGCCGAGGCAGTAGGCGACCAGCGAACC 40285
| ||| | || ||||| ||||| || || ||| | || || || || || ||
Sbjct 120 TAAGTCGTAATGAATAGGGTCGAGGTCGGTAATATTGAGCGAATAAGCAACGAGTGAGCC 179
Query 40286 GGCAGCCGAGCCACGTCCGGGTCCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAA 40345
||| | || ||||| || || ||||| ||||| || | || ||||| | ||| ||
Sbjct 180 TGCACCAGAACCACGACCAGGACCGACTGGTACGCCATTGGCTTTTGCCCAACGGATAAA 239
Query 40346 GTCGGCGACGACCAGGAAGTA 40366
||| ||||| ||||||||
Sbjct 240 GTCCATGACGATGAGGAAGTA 260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159141467560656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |