Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031085.1
Length=166634
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 203 3e-47
seq506238 138 1e-27
seq509673 109 6e-19
seq487923 107 2e-18
seq351952 96.9 4e-15
seq511551 95.1 1e-14
seq326422 89.7 5e-13
>seq449735
Length=3187
Score = 203 bits (224), Expect = 3e-47
Identities = 408/595 (69%), Gaps = 19/595 (3%)
Strand=Plus/Minus
Query 140299 AATAGTTCACGGGCTTTAATGCGCTTTTTACGAAT--ATTAGGGTCTTTTTCTGCTGCTT 140356
|| |||||| ||||||||||| ||||||||||| ||| | |||| ||| | |
Sbjct 611 AACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTGATTCG--TCTTGTTCGTATTTTA 554
Query 140357 CGTATAATTCACGG-AAACG-GTCTTGGTCTTTAAAATAAGAATAATAAAGCTCGCCACC 140414
| |||| | || |||| ||||||||||| |||| | | || ||||| |||
Sbjct 553 C--ATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAG---GCCTGG 499
Query 140415 CATTTCATGCGGACTGAACAAAGTAATGTAGTCGTTCTTTCCAAAACGTTCCATCATTAG 140474
|| ||| || || ||||| ||||||||||||| || ||||| ||||||
Sbjct 498 CACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAG 439
Query 140475 ATCATTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACACCTTTGTT 140534
| ||| | || || || ||||| | |||||| | |||||| || || || || |||
Sbjct 438 TTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTT 379
Query 140535 ATTTTTCAAAACAAGAAGATTTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTA 140592
|||||| | || | || ||||| ||||| |||||||||| || || | ||| ||
Sbjct 378 ATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTT 321
Query 140593 GCAGCGCCGCCACGAATTCCACCTTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTC 140652
|| ||||||||||| | || ||||| || || |||||| || || ||||| || ||
Sbjct 320 GCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTA 261
Query 140653 CAAAAAGGAATAACACCAGTATG--ACGTACTTCACCCATGCCAATCTTAGAACCTTCGG 140710
||||||||||| ||| ||||| ||| |||| || ||| ||| | ||| |
Sbjct 260 TAAAAAGGAATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTG 203
Query 140711 CACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTG 140770
||||||| ||| ||||||| ||||| || || |||| || | |||| ||||||||
Sbjct 202 CACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG 143
Query 140771 AAGCGGAAGCCTTATTGATAGACTTTAATGAATCACCTGCCTCAATAACAACACATGAAC 140830
|| || | || || || | | || || ||| || | ||||| || |
Sbjct 142 CAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGC 83
Query 140831 TAAACTGTCGAGTCGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAAT 140885
||||||| || || || |||||| ||| |||||||| || || |||| ||||||
Sbjct 82 TAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
>seq506238
Length=275
Score = 138 bits (152), Expect = 1e-27
Identities = 141/184 (77%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 62744 ATTACAAACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 62803
||||||| | || ||||| ||||| | | ||||| |||| ||||| || || | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 62804 AGTTAAAGCGAACTGCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 62863
||||||| || ||||| || || |||||||| || || | || ||||||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 62864 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCAC 62923
| ||||| |||||||||| ||||||||||| | || || ||||| | ||||||||||
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 62924 CTTC 62927
||||
Sbjct 218 CTTC 221
>seq509673
Length=441
Score = 109 bits (120), Expect = 6e-19
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 140485 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACACCTTTGTTATTTTTCA-A 140543
|| || || |||||||||||||| | ||||| ||||| || || |||||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 140544 AACAAGAA-GATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGC 140602
| ||| || || |||||||| |||||||| | || ||| | || || || ||||
Sbjct 288 ACCAATAATGA--CTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGC 345
Query 140603 CACGAATTCCACCTTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAA 140662
|||| | || ||||||||||| ||||||||||||| || || |||| | || || |
Sbjct 346 CACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGA 405
Query 140663 TAACACCAGTATG 140675
|| ||| |||||
Sbjct 406 TACAACCCGTATG 418
>seq487923
Length=1072
Score = 107 bits (118), Expect = 2e-18
Identities = 150/202 (74%), Gaps = 9/202 (4%)
Strand=Plus/Minus
Query 24855 ATACTAATTTATCTAATACGTATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 24914
||| |||||||| |||| || || |||||||| ||||||||| |||||||| ||
Sbjct 528 ATAGTAATTTAT---ATACATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472
Query 24915 CGTCATTTGAGCGCATGCTT-ACTAC-TGCATTGACTTTCTTATCACGAATCAGGTACT- 24971
||||| ||||||| || || || | | ||| | ||| ||||||||||| | ||||
Sbjct 471 CGTCACATGAGCGC-TGATTGACAATATAGATTAA-TTTATTATCACGAATAAA-TACTT 415
Query 24972 GTACTGTATTAGTACACATGAAATCTGACATACCATCTTTATTGTAATCAAATTGCATGG 25031
| || |||||||||| || ||||||||||| ||| |||| | ||| ||| || |
Sbjct 414 GAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAG 355
Query 25032 ATGGACGAGTATAAATCATGAT 25053
| || | |||||||||||| ||
Sbjct 354 AAGGTCTAGTATAAATCATAAT 333
>seq351952
Length=416
Score = 96.9 bits (106), Expect = 4e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 62758 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62817
||||||||||| | ||| || || ||| ||||| | ||| | |||||||| || |||
Sbjct 34 GTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGAGTTAAATCGTACT 93
Query 62818 GCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 62877
|| || || |||||||| || || | || ||||| || || |||| | | ||||||
Sbjct 94 GCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATTTTCCATTGCATCC 153
Query 62878 TCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACCTTCAAT 62930
| ||||||| || || || ||||| | ||||||||||||||||||
Sbjct 154 AATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACCTTCAAT 206
>seq511551
Length=634
Score = 95.1 bits (104), Expect = 1e-14
Identities = 192/278 (69%), Gaps = 18/278 (6%)
Strand=Plus/Minus
Query 43695 CGAGGAAGATTCAATGTTACAACACCAAGATTATTACGTCCATCAAGAATTTCATTGCCA 43754
||||| || || || |||| ||||| | || ||||||||||||| | ||| || |||
Sbjct 492 CGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATCAAACACTTCCTTACCA 433
Query 43755 GTCGAATCTTTCCATACGCTCAA--GAAACTACGGCAACCCAT---TGGAGAAACAGGAA 43809
| || ||||| |||| ||| | ||| || | ||| ||||| || || | |
Sbjct 432 GAAGAGTCTTT--ATACTCTCCAAGGAAGCTCCTGCAGCCCATGCTTGCCTTAAAACCAC 375
Query 43810 CAGATGAACCAGTGATAGCTTTATTGTTCTTAGCTGAAATAATATCAGGATACATCCTTT 43869
||| |||| | | ||| || ||| ||| |||||||||| ||||| | |
Sbjct 374 CAGT--AACCTCTACAATCTTA-----TCGTAGTTGA--TAATATCAGGGTACATACGCT 324
Query 43870 TGCTTGCACACTCTAGAGCAAGCTGCTTAATATCATAGTTCGGATCGTCTT-TATAAAGA 43928
| || |||||||||||||| | ||| ||||||| |||||| || || || | | |||||
Sbjct 323 TACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGGTCTTCCTGTTTAAAG- 265
Query 43929 TTAACACCTTCTTCAACGAACATAACAAGCTTAGGGAA 43966
|| ||||| |||| || | | ||||||||||||
Sbjct 264 TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAA 227
>seq326422
Length=2068
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/115 (79%), Gaps = 4/115 (3%)
Strand=Plus/Plus
Query 71040 GCGCTCTACCAAACTGAGCTACAC--GGAGTAAATTAAATTGGAGCGGATAATGAGAATC 71097
|||||||||||| |||||||| | | | | |||| |||||||| | | |||||
Sbjct 291 GCGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATC 349
Query 71098 GAACTCACATCATCAGATTGGAAGTCTGAGGTAAT-GCCATTATACGATATCCGC 71151
|||| | ||||||||| ||||||| |||||||||| ||||||||||||| ||||
Sbjct 350 GAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529598980792480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |