Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031086.1 Length=40570 Score E Sequences producing significant alignments: (Bits) Value seq516303 136 1e-27 >seq516303 Length=336 Score = 136 bits (150), Expect = 1e-27 Identities = 222/317 (70%), Gaps = 7/317 (2%) Strand=Plus/Minus Query 18575 GAATTAGATCAGTTCCAATTCTGGAAAGGTTTAATGAGTTCATGGTATACACAAGAAGCT 18634 || || || |||||| | ||||||||| |||||| | ||||| || || Sbjct 314 GAGTTGGAACAGTTCAAGTTCTGGAAAACCCAGATGAGTGCTTGGTACACTGCTGAGAAC 255 Query 18635 AAACGTGTTGGTCGTCAACATGGTATCTTAAGTCGTATTCAAGAGTTGGTTAAATATCAG 18694 |||||| |||||||| |||||| | ||| | |||||| | | ||||| Sbjct 254 AAACGTAAGGGTCGTCATGTAGGTATCCTGAGTAAGCTCACAGAGTTAGCTCGTTATCAA 195 Query 18695 GATGAAGAACGTTTGTACTTTCCAACGTTTATTGATTGGAGAGGTCGTCTTTACTTCCGT 18754 || || | | ||||||| ||||| |||||||||||| | || || | ||||| | Sbjct 194 GACGAGGTAGCCCTGTACTTCCCAACCTTTATTGATTGGCGTGGACGATTGTACTT---T 138 Query 18755 AGCAGTA---TTAACCCACAGTCCAACGATTGTATTAAAGGTTGTCTTGAATTTGCAGAG 18811 || |||| | || |||||||| | | ||| | |||||||||||||| || || ||| Sbjct 137 AGAAGTAACTTGAATCCACAGTC-ATCTATTCAGTCAAAGGTTGTCTTGAGTTCGCTGAG 79 Query 18812 GGTAAACCTTTAGGTAAAACTGGACTAAAATGGTTAAAGATTCATGTTGCAAACTGTTGT 18871 ||||||| | ||||| | ||| || | |||||||| |||||| || ||||| ||| Sbjct 78 GGTAAACGTCTAGGTTCAGATGGTCTTATGTGGTTAAAAGCTCATGTAGCTAACTGCTGT 19 Query 18872 GGTTATGATAAACATGA 18888 |||||||||||||| || Sbjct 18 GGTTATGATAAACACGA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128893013411568