Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031087.1
Length=168272
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 242 4e-59
seq506238 111 2e-19
>seq449735
Length=3187
Score = 242 bits (268), Expect = 4e-59
Identities = 336/467 (72%), Gaps = 4/467 (1%)
Strand=Plus/Minus
Query 141200 GGGACTAAACAGAGTGATGTAATCATTCTTAATCAAACGTTCAATCATCAGGTTATTAAT 141259
||| ||||||| || ||||| || | ||||| ||||| ||| || |||||||
Sbjct 489 GGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAA 430
Query 141260 CTGAACGCCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTAAG 141319
||| ||||| |||||||||||||| | ||||| ||||| || || ||| || |||||
Sbjct 429 CTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAG 370
Query 141320 TACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCGCCACC 141379
||| | |||||||| ||||| || ||||| | || ||| ||| || || ||||| ||
Sbjct 369 TACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAGGTTGCTGCGCCGCC 310
Query 141380 ACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGTTTCCAGAAAGGAAT 141439
||| || || ||||| || ||| |||||| |||||||| ||||| || | ||||||||
Sbjct 309 ACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAAT 250
Query 141440 AACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCCTCGGCGCGAATCATGCC 141499
| || ||||| | |||| || | ||| | |||| || ||||| ||
Sbjct 249 ACAACCCGTATGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACC 190
Query 141500 TGCATTAATACCAATACCTGCACGCTTACTGAT--GTATTTCGTAATTGATGCAGCAGCT 141557
||| ||||| ||||| || ||||| || | ||| |||||| ||||| | | |
Sbjct 189 TGCGTTAATGCCAATGCCGGCACG-TTGC-GATACGTATTTAACAATTGCAGACGAGGTG 132
Query 141558 TCGTTAATTGAATTAAGACTATCACCACCTTCAATAACCACGCATGAACTGAACTGGCGT 141617
|||||||||||| ||| || || |||| || || | || || || || |||||||||
Sbjct 131 GCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGT 72
Query 141618 GTCGGAGTACGAACACCAGACATAATTGGTGTTGGCAATGAAATCTT 141664
|| || ||||||||||| | ||||||||| || || | |||||| ||
Sbjct 71 GTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAATTTT 25
>seq506238
Length=275
Score = 111 bits (122), Expect = 2e-19
Identities = 135/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 59989 ATTATAGTGCCTCTGTGAAAGTACGGGCGATAACGTCGCGCTGCTGTTCTGGTGTCAGGG 60048
|||| | || ||||| || ||||| | | ||||| |||| ||||||||||| | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 60049 AGTTAAAGCGCACCGCGTAGCCGGAAACACGAATGGTAAGCTGCGGGTATTTTTCCGGAT 60108
||||||| ||||| ||||| || || |||||||| || | || || |||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 60109 GCTCAACCGCGTCCAGCAGAGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGC 60168
| | ||| || || || ||||| ||||| | ||| || ||||| | || ||||| |
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 60169 CTTC 60172
||||
Sbjct 218 CTTC 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534806149901440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |