Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq449735 235 6e-57 seq506238 129 6e-25 seq458811 91.5 2e-13 >seq449735 Length=3187 Score = 235 bits (260), Expect = 6e-57 Identities = 335/466 (72%), Gaps = 4/466 (1%) Strand=Plus/Plus Query 136382 AAGATTTCATTGCCAACACCAATTATGTCTGGTGTTCGTACTCCAACCCGCCAGTTCAGT 136441 || |||||| | || || ||||||||| | ||||||||||| ||||| |||||||| || Sbjct 25 AAAATTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGC 84 Query 136442 TCATGCGTAGTTATTGAAGGTGGTGATAGTCTTAATTCAATTAACGAAGCCGCTGCATCA 136501 || || ||| | || || |||| || || ||| |||||||||||| || | | || Sbjct 85 TCGTGTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCA 144 Query 136502 ATTACGAAATACAT-TAGTAAGCGTGCTGGTATTGGTATTAATGCGGGGATGATTCGTGC 136560 ||| |||||| | | | || ||||| || ||||| ||||| || || |||||||| Sbjct 145 ATTGTTAAATACGTATCGCAA-CGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGC 203 Query 136561 AGAAGG-ATCAAAAATTGGATTCGGTGAAGTCAAGCATACTGGTGTTATTCCTTTCTGGA 136619 | || | | | | | | | | || |||| | ||||| ||| ||||||||| | | Sbjct 204 ACTGGGTAGCCACATTCGCAAT-GGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATA 262 Query 136620 AACACTTCCAAACCGCAGTTAAGTCATGCTCCCAAGGCGGAGTCCGTGGTGGTGCAGCTA 136679 | ||||| ||||| || ||||| || || |||||||| || ||||| || ||||| | Sbjct 263 AGCACTTTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAA 322 Query 136680 CACTGTATTATCCGATGTGGCACTTGGAAGTTGAAAACCTCCTCGTACTTAAGAACAACA 136739 | ||| || ||| | ||||| || ||||| |||||||| | |||||||| || ||| Sbjct 323 CCTTGTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACC 382 Query 136740 AAGGTGTAGATGAAAACCGTATTCGCCATTTAGATTATGGTGTTCAGATTAATAACCTGA 136799 || || ||||| ||||| | || ||||||||||| || || ||| ||||||| || | Sbjct 383 GCGGGGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAA 442 Query 136800 TGATTGAACGTTTGATTAAGAATGATTACATCACTCTGTTTAGTCC 136845 || ||||| ||||| | || ||||| || ||||||| || Sbjct 443 TGTACTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCC 488 >seq506238 Length=275 Score = 129 bits (142), Expect = 6e-25 Identities = 139/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 47305 GAAGGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCGGTT 47364 ||||| ||||| || | ||||| || ||||| ||||| ||||| ||| ||||| ||| Sbjct 221 GAAGGTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTT 162 Query 47365 GAGCACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGCTTC 47424 | ||||| |||||||| || || | |||||||| || || || ||||| ||||| || Sbjct 161 AAACACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTT 102 Query 47425 AACTCCTTGACACCAGAACAGCAGCGCGACGTTATCGCTCGTACTTTCACAGAGGCACTA 47484 ||||| || ||||||||||| |||| ||||| | | ||||| || ||||| || | Sbjct 101 AACTCATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTACAGAAACATTG 42 Query 47485 TAAT 47488 |||| Sbjct 41 TAAT 38 >seq458811 Length=383 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 347 AAATGGTCGAGGCAGAAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTA 406 ||||||| | |||||||||||||||||||||||| || ||||||| || ||||||| Sbjct 45 AAATGGTGCACCCAGAAGGATTCGAACCTTCGACCTACGCCTTAGAAGGGCGTTGCTCTA 104 Query 407 TCCAGCTGAGCTATG 421 ||||||||||||||| Sbjct 105 TCCAGCTGAGCTATG 119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536351134142560