Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031095.1
Length=168758
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 235 6e-57
seq506238 129 6e-25
seq458811 91.5 2e-13
>seq449735
Length=3187
Score = 235 bits (260), Expect = 6e-57
Identities = 335/466 (72%), Gaps = 4/466 (1%)
Strand=Plus/Plus
Query 136382 AAGATTTCATTGCCAACACCAATTATGTCTGGTGTTCGTACTCCAACCCGCCAGTTCAGT 136441
|| |||||| | || || ||||||||| | ||||||||||| ||||| |||||||| ||
Sbjct 25 AAAATTTCACTACCTACGCCAATTATGGCAGGTGTTCGTACGCCAACACGCCAGTTTAGC 84
Query 136442 TCATGCGTAGTTATTGAAGGTGGTGATAGTCTTAATTCAATTAACGAAGCCGCTGCATCA 136501
|| || ||| | || || |||| || || ||| |||||||||||| || | | ||
Sbjct 85 TCGTGTGTATTAATAGAGTGTGGCGACAGCCTTGATTCAATTAACGCCACCTCGTCTGCA 144
Query 136502 ATTACGAAATACAT-TAGTAAGCGTGCTGGTATTGGTATTAATGCGGGGATGATTCGTGC 136560
||| |||||| | | | || ||||| || ||||| ||||| || || ||||||||
Sbjct 145 ATTGTTAAATACGTATCGCAA-CGTGCCGGCATTGGCATTAACGCAGGTCGCATTCGTGC 203
Query 136561 AGAAGG-ATCAAAAATTGGATTCGGTGAAGTCAAGCATACTGGTGTTATTCCTTTCTGGA 136619
| || | | | | | | | | || |||| | ||||| ||| ||||||||| | |
Sbjct 204 ACTGGGTAGCCACATTCGCAAT-GGCGAAGCGTACCATACGGGTTGTATTCCTTTTTATA 262
Query 136620 AACACTTCCAAACCGCAGTTAAGTCATGCTCCCAAGGCGGAGTCCGTGGTGGTGCAGCTA 136679
| ||||| ||||| || ||||| || || |||||||| || ||||| || ||||| |
Sbjct 263 AGCACTTTCAAACAGCGGTTAAAAGCTGTTCGCAAGGCGGTGTACGTGGCGGCGCAGCAA 322
Query 136680 CACTGTATTATCCGATGTGGCACTTGGAAGTTGAAAACCTCCTCGTACTTAAGAACAACA 136739
| ||| || ||| | ||||| || ||||| |||||||| | |||||||| || |||
Sbjct 323 CCTTGTTCTACCCGCTTTGGCATTTAGAAGTAGAAAACCTGTTAGTACTTAAAAATAACC 382
Query 136740 AAGGTGTAGATGAAAACCGTATTCGCCATTTAGATTATGGTGTTCAGATTAATAACCTGA 136799
|| || ||||| ||||| | || ||||||||||| || || ||| ||||||| || |
Sbjct 383 GCGGGGTTGATGACAACCGCGTGCGTCATTTAGATTACGGCGTACAGTTTAATAAACTAA 442
Query 136800 TGATTGAACGTTTGATTAAGAATGATTACATCACTCTGTTTAGTCC 136845
|| ||||| ||||| | || ||||| || ||||||| ||
Sbjct 443 TGTACTCGCGTTTAATTAAAGACGACTACATTACCTTGTTTAGCCC 488
>seq506238
Length=275
Score = 129 bits (142), Expect = 6e-25
Identities = 139/184 (76%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 47305 GAAGGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCGGTT 47364
||||| ||||| || | ||||| || ||||| ||||| ||||| ||| ||||| |||
Sbjct 221 GAAGGTGGTCAACATTTAAACGTGAATGTGTTACGTCGTGAAACATTGGAAGATGCTGTT 162
Query 47365 GAGCACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTCCGGATACGCGGTGCGCTTC 47424
| ||||| |||||||| || || | |||||||| || || || ||||| ||||| ||
Sbjct 161 AAACACCCTGAAAAATATCCACAATTAACTATTCGTGTATCAGGTTACGCAGTGCGTTTT 102
Query 47425 AACTCCTTGACACCAGAACAGCAGCGCGACGTTATCGCTCGTACTTTCACAGAGGCACTA 47484
||||| || ||||||||||| |||| ||||| | | ||||| || ||||| || |
Sbjct 101 AACTCATTAACACCAGAACAACAGCAAGACGTATTAACACGTACATTTACAGAAACATTG 42
Query 47485 TAAT 47488
||||
Sbjct 41 TAAT 38
>seq458811
Length=383
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 347 AAATGGTCGAGGCAGAAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTA 406
||||||| | |||||||||||||||||||||||| || ||||||| || |||||||
Sbjct 45 AAATGGTGCACCCAGAAGGATTCGAACCTTCGACCTACGCCTTAGAAGGGCGTTGCTCTA 104
Query 407 TCCAGCTGAGCTATG 421
|||||||||||||||
Sbjct 105 TCCAGCTGAGCTATG 119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536351134142560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |