Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031103.1
Length=165772
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 197 1e-45
seq506238 134 1e-26
seq509673 114 1e-20
seq487923 102 9e-17
seq351952 102 9e-17
seq511551 98.7 1e-15
seq326422 89.7 5e-13
>seq449735
Length=3187
Score = 197 bits (218), Expect = 1e-45
Identities = 407/595 (68%), Gaps = 19/595 (3%)
Strand=Plus/Minus
Query 138230 AACAGTTCACGGGCTTTAATACGCTTTTTACGAAT--ATTAGGGTCTTTTTCTGCGGCTT 138287
||||||||| |||||||| || ||||||||||| ||| | |||| ||| ||
Sbjct 611 AACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTGATTCG--TCTTGTTCGTAT--TT 556
Query 138288 CATATAATTCACGG-AAACG-GTCTTGGTCTTTAAAATAAGAATAATAAAGCTCACCACC 138345
| |||| | || |||| ||||||||||| |||| | | || ||||| ||
Sbjct 555 TACATAAAGCGCGTCAAACTCGTCTTGGTCTTCAAAAAATGCATCGTAAAGG---CCTGG 499
Query 138346 CATTTCATGTGGACTGAACAAAGTAATGTAGTCGTTCTTTCCAAAACGTTCCATCATTAG 138405
|| ||| || || ||||| ||||||||||||| || ||||| ||||||
Sbjct 498 CACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAG 439
Query 138406 GTCATTCAGTTGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTT 138465
| ||| | || ||||| ||||| | |||||| | ||||| || || || || |||
Sbjct 438 TTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTT 379
Query 138466 ATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTA 138523
|||||| | || | || ||||| ||||| |||||||||| || || | ||| ||
Sbjct 378 ATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTT 321
Query 138524 GCAGCGCCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTC 138583
|| ||||||||||| | || || || || || |||||| || || ||||| || ||
Sbjct 320 GCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTA 261
Query 138584 CAAAAAGGAATAACACCAGTATG--ACGTACTTCACCTGTACCAATCTTAGAACCTTCGG 138641
||||||||||| ||| ||||| ||| |||| || | | ||| | ||| |
Sbjct 260 TAAAAAGGAATACAACCCGTATGGTACG--CTTCGCCATTGCGAATGTGGCTACCCAGTG 203
Query 138642 CACGAATCATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTG 138701
||||||| ||| ||||||| ||||| || || |||| || | |||| ||||||||
Sbjct 202 CACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGCGATACGTATTTAACAATTG 143
Query 138702 AAGCAGAAGCTTTGTTAATAGACTTCAGCGAATCACCTGCTTCAATAACAACGCATGAAC 138761
|| || | |||||| || | || || || || || | || || || |
Sbjct 142 CAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACACTCTATTAATACACACGAGC 83
Query 138762 TAAACTGCCGAGTTGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAAT 138816
||||||| || ||||| |||||| ||| |||||||| || || |||| ||||||
Sbjct 82 TAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGCGTAGGTAGTGAAAT 28
>seq506238
Length=275
Score = 134 bits (148), Expect = 1e-26
Identities = 140/184 (76%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 60306 ATTACAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 60365
|||||| | || ||||| ||||| | | ||||| |||| ||||| || || | |
Sbjct 38 ATTACAATGTTTCTGTAAATGTACGTGTTAATACGTCTTGCTGTTGTTCTGGTGTTAATG 97
Query 60366 AGTTAAAGCGAACTGCATAACCGGATACGCGGATGGTCAGCTGCGGATATTTTTCCGGAT 60425
||||||| || ||||| ||||| ||||| || || || | || ||||||||||| || |
Sbjct 98 AGTTAAAACGCACTGCGTAACCTGATACACGAATAGTTAATTGTGGATATTTTTCAGGGT 157
Query 60426 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 60485
| ||||| |||||||||| ||||||||||| | || || ||||| | ||||||||||
Sbjct 158 GTTTAACAGCATCTTCCAATGTTTCACGACGTAACACATTCACGTTTAAATGTTGACCAC 217
Query 60486 CTTC 60489
||||
Sbjct 218 CTTC 221
>seq509673
Length=441
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 138416 TGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 138475
|| ||||| |||||||||||||| | |||||| ||||| ||||| |||||||||||
Sbjct 228 TGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTTTTCAGT 287
Query 138476 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138535
|| | | |||||||| |||||||| | || ||| | || || || ||||||
Sbjct 288 ACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCACCGCCA 347
Query 138536 CGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138595
|| | || || |||||||| ||||||||||||| || || |||| | || || |||
Sbjct 348 CGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAATGGGATA 407
Query 138596 ACACCAGTATG 138606
||| |||||
Sbjct 408 CAACCCGTATG 418
>seq487923
Length=1072
Score = 102 bits (112), Expect = 9e-17
Identities = 149/202 (74%), Gaps = 9/202 (4%)
Strand=Plus/Minus
Query 23675 ATACTAATTTATCTAATACGTATTTTTGCCATGCATAATCATTACGGAATCCGAAGACCA 23734
||| |||||||| |||| || || |||||||| ||||||||| |||||||| ||
Sbjct 528 ATAGTAATTTAT---ATACATACTTATGCCATGCTAAATCATTACCAAATCCGAATACTG 472
Query 23735 CATCATTTGAGCGCATGCTT-ACTAC-TGCATTGACTTTCTTATCACGAATCAGATACT- 23791
| ||| ||||||| || || || | | ||| | ||| ||||||||||| | |||||
Sbjct 471 CGTCACATGAGCGC-TGATTGACAATATAGATTAA-TTTATTATCACGAATAA-ATACTT 415
Query 23792 GTACTGTATTCGTACACATGAAATCTGACATACCATCTTTATTGTAGTCAAATTGCATTG 23851
| || |||| ||||| || ||||||||||| ||| |||| | ||| ||| || |
Sbjct 414 GAACATTATTAGTACAAATAAAATCTGACATTTCATTAGTATTCCATTCACTTTGAATAG 355
Query 23852 ATGGACGAGTATAAATCATGAT 23873
| || | |||||||||||| ||
Sbjct 354 AAGGTCTAGTATAAATCATAAT 333
>seq351952
Length=416
Score = 102 bits (112), Expect = 9e-17
Identities = 134/186 (72%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 60307 TTACAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGA 60366
||| || || | ||||||||||| | ||| || || ||| ||||| | ||| | ||
Sbjct 21 TTATAGCGTCGCTGTAAAGGTACGTGTGATTACATCTTGCTTTTGTTCTGCAGTTAACGA 80
Query 60367 GTTAAAGCGAACTGCATAACCGGATACGCGGATGGTCAGCTGCGGATATTTTTCCGGATG 60426
|||||| || ||||| ||||| ||||| || || || | || ||||| || || ||||
Sbjct 81 GTTAAATCGTACTGCGTAACCCGATACACGAATTGTTAATTGTGGATACTTATCTGGATT 140
Query 60427 CTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 60486
| | |||||| | ||||||| || || |||||||| | ||||||||||||
Sbjct 141 TTCCATTGCATCCAATAACATTTCACGGTTCATTACATTAACGTTTAAGTGTTGACCACC 200
Query 60487 TTCAAT 60492
||||||
Sbjct 201 TTCAAT 206
>seq511551
Length=634
Score = 98.7 bits (108), Expect = 1e-15
Identities = 193/278 (69%), Gaps = 18/278 (6%)
Strand=Plus/Minus
Query 41696 CGAGGAAGATTCAGTGTTACAACACCAAGATTATTACGTCCATCAAGAATTTCATTACCA 41755
||||| || || | |||| ||||| | || ||||||||||||| | ||| ||||||
Sbjct 492 CGAGGTAGGTTTAAGCTTACCACACCTAAGTTGTTACGTCCATCAAACACTTCCTTACCA 433
Query 41756 GTCGAATCTTTCCATACGCTCAA--GAAACTACGGCAACCCAT---TGGAGAAACAGGAA 41810
| || ||||| |||| ||| | ||| || | ||| ||||| || || | |
Sbjct 432 GAAGAGTCTTT--ATACTCTCCAAGGAAGCTCCTGCAGCCCATGCTTGCCTTAAAACCAC 375
Query 41811 CAGATGAACCAGTGATAGCTTTATTGTTCTTAGCTGAAATAATATCAGGATACATCCTTT 41870
||| |||| | | ||| || ||| ||| |||||||||| ||||| | |
Sbjct 374 CAGT--AACCTCTACAATCTTA-----TCGTAGTTGA--TAATATCAGGGTACATACGCT 324
Query 41871 TGCTTGCACACTCTAGAGCAAGCTGTTTAATATCATAGTTCGGATCGTCTT-TATAAAGA 41929
| || |||||||||||||| | ||||||||||| |||||| || || || | | |||||
Sbjct 323 TACTGGCACACTCTAGAGCTAACTGTTTAATATTATAGTTTGGGTCTTCCTGTTTAAAG- 265
Query 41930 TTAACACCTTCTTCAACGAACATAACAAGCTTAGGGAA 41967
|| ||||| |||| || | | ||||||||||||
Sbjct 264 TTGACACCGTCTTTAATAGTTAGGATAAGCTTAGGGAA 227
>seq326422
Length=2068
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/115 (79%), Gaps = 4/115 (3%)
Strand=Plus/Plus
Query 70364 GCGCTCTACCAAACTGAGCTACAC--GGAGTAAATTAAATTGGAGCGGATAATGAGAATC 70421
|||||||||||| |||||||| | | | | |||| |||||||| | | |||||
Sbjct 291 GCGCTCTACCAA-CTGAGCTATATCAGCATCACCATAAACTGGAGCGGGCAGCGGGAATC 349
Query 70422 GAACTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGC 70475
|||| | ||||||||| ||||||| ||||||||||| |||||||||||| ||||
Sbjct 350 GAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526858700101440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |