Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031104.1
Length=72979
Score E
Sequences producing significant alignments: (Bits) Value
seq486019 318 3e-82
seq488807 205 4e-48
seq255804 190 9e-44
seq523594 109 3e-19
seq505100 91.5 7e-14
>seq486019
Length=823
Score = 318 bits (352), Expect = 3e-82
Identities = 472/665 (71%), Gaps = 3/665 (0%)
Strand=Plus/Plus
Query 68200 TCACCATCCTGGATGAGACGGTCTTCGTCGGACATGATCTGGAGCATAAGCTCTTGGTTG 68259
|||| ||| || || ||||| || ||||| |||||||| | | |||||||||||||||
Sbjct 159 TCACAATCTTGAATTAGACGATCCTCGTCTGACATGATTCGTAACATAAGCTCTTGGTTA 218
Query 68260 AACGTCTCGATCTTCCCTGCCTTCTTGGCCAGGGTGTACTTCTGCAACACGAAGTCGTAG 68319
|| || || | ||| |||||||| || ||||| || | || || || | ||
Sbjct 219 AATGTATCCACCTTACCTGCCTTAAAAGCTTTAGTGTATTTGTCTAAAACAAATTGATAT 278
Query 68320 GTGAATCGGTCAGCCCATGCACCCCTGAACTCTTCCCGCGAACACGGGAATCTCTCGCAC 68379
| ||| || |||| ||| ||||| || || |||| | ||| || || | | |||
Sbjct 279 GAGAAACGATCAGGCCACGCACCTCTAAAGTCTTTCTCTTCACAAGGAAAATTAGCACAC 338
Query 68380 ACAGGGTAGACGTTGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGAGGATCCTTC 68439
|||||||| ||||| || ||| ||||||||||| ||||||||||| | ||||| |
Sbjct 339 ACAGGGTACACGTTAACTGCCCAAGCACCAGACTCAACTGCTTTGTATAATGGATCACGC 398
Query 68440 GCGTTGAACGGTGTACCCGACCAGATGATCAT-GTTCTTCTTCGGGTGCAGTGCATAGTC 68498
| ||| || || ||||| |||||||| | | | | | | || |||| | ||| |||||
Sbjct 399 GAGTTAAAGGGAGTACCTGACCAGATTACCTTAGAGCGTATT-GGGTCTAATGCGTAGTC 457
Query 68499 CACTGCCTTGTACACCGTGTCTTCGATGGCTGCGATGACGGTTGGCGAGCGAGCATCTTC 68558
| ||||||||||| || ||||| | || | || || || | || | ||||||||
Sbjct 458 AATAGCCTTGTACACTGTATCTTCTACAGCAGAAATAACTGTAGCTGACCTCGCATCTTC 517
Query 68559 GTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGTCGCTTACCCATCTCCTTCGCACC 68618
||||| | |||||||| ||||| |||||| || || ||||||||| || |||||
Sbjct 518 ATCCGATATTAAGTCATCTAGTACAGCAAGCACTGGACGAACACCCATCTCTTTAGCACC 577
Query 68619 ACGGACACCAGTCTTGGCACCGTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGT 68678
||| ||||| ||||| || || || || || ||||| || || || || | ||| |
Sbjct 578 ACGTACACCGGTCTTTGCGCCATAACCTTTTACGATAAATCGGTTACCATCAATGTTATT 637
Query 68679 GAACTTCCAGCGGATGTCAGTGAAGTTGGTTTGGGGGATGTACTTCTTCAGGAACTCGGA 68738
|| | |||||| || |||||||| | || | || | ||||| | || || ||
Sbjct 638 AAATTCCCAGCGTATATCAGTGAACCTAGTGT-AGGTACATACTTAAGTAAAAATTCTGA 696
Query 68739 GTTCTCCCACCGGAACTCCAGGTTCTTCCGCATGTTCTTCACACCGTTGTCGATGGAGTC 68798
||| ||||| |||||||||| |||||| ||||||||||| |||||||| || || ||
Sbjct 697 GTTTTCCCAACGGAACTCCAAGTTCTTACGCATGTTCTTAACACCGTTCTCTATACTATC 756
Query 68799 CGATACGTACAGAGCAAGGTCTACCTTACCGAAACCAGGAAGCTCACCGTACAGTGCAAT 68858
|| || |||||||| | | || ||||| || || || | |||||||| || ||
Sbjct 757 TGAAACATACAGAGCCAAGGGAACTTTACCAAACCCGGGGATGTCACCGTAACAAGCTAT 816
Query 68859 GTACA 68863
|||||
Sbjct 817 GTACA 821
>seq488807
Length=774
Score = 205 bits (226), Expect = 4e-48
Identities = 352/503 (70%), Gaps = 10/503 (2%)
Strand=Plus/Minus
Query 68019 CATGTCCTGGCGTTCACAGATACCATCTACCCACAGCCAGTCCT-CGTTGTGAGAGTAG- 68076
|||||| || | || || ||||| |||||||| | ||| | | | | |||| ||
Sbjct 498 CATGTCTTGTTGCTCGCAAATACCGTCTACCCAGAACCA--CGTACCATCTGAGCTAAGC 441
Query 68077 GCCCAGACACTGATGATGCTGAAGTCACTGGCCTTCTTCGCAGAGGTAGCGAAGTCAGTA 68136
||||| ||| || | ||| ||||| || |||| || ||||||| || || || |||
Sbjct 440 GCCCATACAGATATTACGCTAAAGTCGCTAGCCTCTTTTTCAGAGGTTGCAAAATCCGTA 381
Query 68137 GTGACGTAGAAGTTGTACCGCTTCTTGT-TGTCCAGCACGTTGCG--ACGCATGTACCAA 68193
|||| ||||||||||||| || |||| | | || | ||| ||| |||||||
Sbjct 380 GTGATGTAGAAGTTGTAC-GCGTCTTTACTCTTAAGAAG--TGCATTACGTGCGTACCAA 324
Query 68194 GCCACCTCACCATCCTGGATGAGACGGTCTTCGTCGGACATGATCTGGAGCATAAGCTCT 68253
| ||||| ||| | || | | |||||| || ||||| || ||||| | ||||
Sbjct 323 TTAATCTCACTATCTTTAATTAATCTGTCTTCTTCTGACATAATTCTTAGCATCAACTCT 264
Query 68254 TGGTTGAACGTCTCGATCTTCCCTGCCTTCTTGGCCAGGGTGTACTTCTGCAACACGAAG 68313
||||| || | || | ||| ||||| || || |||||| | || || || ||
Sbjct 263 TGGTTAAAAGAATCCACCTTACCTGCTTTAACAGCTTTGGTGTATTGCTTCATTACATAG 204
Query 68314 TCGTAGGTGAATCGGTCAGCCCATGCACCCCTGAACTCTTCCCGCGAACACGGGAATCTC 68373
|| || ||||| || |||| ||||| || |||||||||| | || ||| || ||| ||
Sbjct 203 TCATACGTGAAGCGATCAGGCCATGAGCCTTTGAACTCTTCTCTCGTACAAGGAAATTTC 144
Query 68374 TCGCACACAGGGTAGACGTTGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGAGGA 68433
|| ||||||||||| || || || | ||| || || ||||| ||||||||||||| ||
Sbjct 143 TCACACACAGGGTACACATTTACGTACCAAGCTCCTGACTCAACTGCTTTGTACAATGGG 84
Query 68434 TCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGCA 68493
|| ||||| ||||| ||||| |||||||| || | ||| | || |||| |||
Sbjct 83 TCACGGGCGTTAAACGGAGTACCTGACCAGATTATTTTAGACTTGGTAGGATGCAATGCG 24
Query 68494 TAGTCCACTGCCTTGTACACCGT 68516
|| |||||||| || || || ||
Sbjct 23 TAATCCACTGCTTTATAAACTGT 1
>seq255804
Length=3791
Score = 190 bits (210), Expect = 9e-44
Identities = 477/719 (66%), Gaps = 13/719 (2%)
Strand=Plus/Plus
Query 68333 CCCATGCACCCCTGAACTCTTCCCGCGAACACGGGAATCTCTCGCACACAGGGTAGACGT 68392
||||||| || | |||||||| | | ||| || || |||| || | ||| || ||
Sbjct 2268 CCCATGCTCCTTTAAACTCTTCTCTAGTACAAGGAAACTTCTCACATATAGGATATACAC 2327
Query 68393 TGACCTTCCAGGCACCAGACTCCACTGCTTTGTACAGAGGATCCTTCGCGTTGAACGGTG 68452
| || | ||| |||||||| |||| |||| |||| |||||| || || || || || |
Sbjct 2328 TTACATCCCATGCACCAGATTCCATAGCTTCATACAAAGGATCATTAGCATTAAAGGGAG 2387
Query 68453 TACCCGACCAGATGATCATGTTCTTCTTCGGGTGCAGTGCATAGTCCACTGCCTTGTACA 68512
|||| ||| || || | |||||| ||||| |||||||| | | |||| |
Sbjct 2388 TACCAAGCCATATAGTCTTAGACTTCTTAGGGTGAAGTGCATACTTAATAGCCTGACCTA 2447
Query 68513 CCGTGTCTTCGATGGCTGCGATGACGGTTGGCGAGCGAGCATCTTCGTCCGAAACCAAGT 68572
| ||||||| || ||| || || || || || || | || || | ||| ||||
Sbjct 2448 CTGTGTCTTTAATAGCTTGAATAACTGTAGGTGAACGTGAGTCATCATTACTAACTAAGT 2507
Query 68573 CATCCAGTACCGCAAGCTGCGGTCGCTTACCCATCTCCTTCGCACCACGGACACCAGTCT 68632
|||| || | || | ||| || || |||||||||||||| ||||||| | ||| ||||
Sbjct 2508 CATCTAGGATAGCCATCTGTGGGCGTGTACCCATCTCCTTCACACCACGAATACCTGTCT 2567
Query 68633 TGGCACCGTAGCCCTTGACGATGAAGACCTTCCCGTCCAGGTTCGTGAACTTCCAGCGGA 68692
||||||| || ||||| || | ||| | || | | ||| | |||| ||| | |
Sbjct 2568 TGGCACCATACCCCTTTACTACGAATTTAGTACCATTAATATTCTTAAACTCCCACCTAA 2627
Query 68693 TGTCAGTGAAGTT------GGTTTGGGGGATGTACTTCTTCAGGAACTCGGAGTTCTCCC 68746
| || |||| || || || | ||||||| | |||||| ||||||
Sbjct 2628 TATCTGTGAGCTTTAATCCTTCTTTAGGTAGATACTTCTGTAAGAACTCACTACTCTCCC 2687
Query 68747 ACCGGAACTCCAGGTTCTTCCGCATGTTCTTCACACCGTTGTCGATGGAGTCCGATACGT 68806
| || |||| | |||||| | ||| ||| | |||||| || || || ||||| |
Sbjct 2688 AACGAGACTCTAAGTTCTTTCTCATTGACTTAATACCGTTATCAATACTATCTGATACAT 2747
Query 68807 ACAGAGCAAGGTCTACCTTACCGAAACCAGGAAGCTCACCGTACAGTGC-AATGTACAGG 68865
|||| | | | |||||||| || || | ||||||| || || || | |
Sbjct 2748 ACAGCACTAATTTAACCTTACCAAAGGACGGCATTCTGCCGTACACCGCTAAGATATAAG 2807
Query 68866 AACAGGTACTCACCCATCACGGTAGTCTTGGCTGCACCACGGAAGACCATGTTGGCGATC 68925
| ||||||||| |||| | |||||||| |||||||||| |||| |||||| || |
Sbjct 2808 ATAAGGTACTCAGCCATTAGTGTAGTCTTACCTGCACCACGAAAGATCATGTTAGC--TA 2865
Query 68926 CGTGTCTGA--CCGGAACCAATCTGGTCAAGCATACGTAGGTGGAGCACTGGTGTCTTGT 68983
||| ||| | || | | | || || | ||| || ||| | || |||| ||
Sbjct 2866 CGTTTCTTAATCCACCATCTAACTTATCTAACATCTTTAAGTGAATAACAGGTGATACGT 2925
Query 68984 TCTCTTCCCCTTCGTTACCGTTGACCATCTTGATGAA-GTCAACGAACTGCAAGGCAAA 69041
|||| || || || ||| || || | ||| || || ||||| ||||| ||| |||||
Sbjct 2926 TCTCCTCACCCTCACCACCATTAACTAGCTTAATAAACGTCAA-GAACTCCAATGCAAA 2983
>seq523594
Length=514
Score = 109 bits (120), Expect = 3e-19
Identities = 74/83 (89%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 34542 ATCCAGAAGCGGTCTACGTTGAAGCCAGCTTCGACAGTGCGACCGTCGTTGTACACACCG 34601
|||||||||||||| |||| ||| || ||||| ||||||||||| |||||||||||||||
Sbjct 512 ATCCAGAAGCGGTCCACGTCGAAACCGGCTTCTACAGTGCGACCATCGTTGTACACACCG 453
Query 34602 AAGCCACCAACCAAACCATTCAC 34624
|| ||||||| ||||||||| ||
Sbjct 452 AAACCACCAATCAAACCATTGAC 430
>seq505100
Length=723
Score = 91.5 bits (100), Expect = 7e-14
Identities = 346/538 (64%), Gaps = 14/538 (3%)
Strand=Plus/Plus
Query 68109 CTTCTTCGCAGAGGTAGCGAAGTCAGTAGTGACGTAGAAGTTGTACCGCTTCTTGTTGTC 68168
|| |||| || ||| || |||||||||| | || ||||| | | || || |
Sbjct 2 CTCCTTCTCACTGGTTGCAAAGTCAGTAGCAATATAAAAGTTAAAGTTATCTTTCTTATT 61
Query 68169 CAGCACGTTGCGACGCATGTACCAAGCCACCTCACCATCCTGGATGAGACGGTCTTCGTC 68228
||||| || | || | ||||| || |||| ||| || | || | ||||| ||
Sbjct 62 CAGCAAGTCTCTACTGTTATACCACTGCAAATCACTATCATGTACAAGTCTATCTTCTTC 121
Query 68229 GGACATGATCTGGAGCATAAGCTCTTGGTTGAACGTCTCGATCTTCCCTGCCTTCTTGGC 68288
||| ||||| |||||||||||||||| ||| | ||| | | |||||
Sbjct 122 ACTCATAATCTGTAGCATAAGCTCTTGGTAGAAA----CCATCAGCGTTACCTTCAGCAA 177
Query 68289 CAGGGT----GTACTTC-TGCAACACGAAGTCGTAGGTGAATCGGTCAGCCCATGCACCC 68343
||| | |||| || | | | || | ||||| || |||||| ||||||| ||
Sbjct 178 CAGACTCTTCGTACATCGTACTA-ACATACTCGTAACCAAAGCGGTCATCCCATGCGCCT 236
Query 68344 CTGAACTCT--TCCCGCGAACACGGGAATCTCTCGCACACAGGGTAGACGTTGACCTTCC 68401
| |||||| | || | ||| || || |||| || || || || || || | ||
Sbjct 237 TTAAACTCTGATTCCTC--ACAAGGAAACTTCTCACATACTGGATAAACACCTACATCCC 294
Query 68402 AGGCACCAGACTCCACTGCTTTGTACAGAGGATCCTTCGCGTTGAACGGTGTACCCGACC 68461
| ||||||||||| | |||| || | |||||| || || || || || ||||| ||
Sbjct 295 AAGCACCAGACTCAATAGCTTGATATAAAGGATCGTTAGCATTAAAGGGAGTACCAAGCC 354
Query 68462 AGATGATCATGTTCTTCTTCGGGTGCAGTGCATAGTCCACTGCCTTGTACACCGTGTCTT 68521
| || || | ||| | ||||| | ||||| | | |||| || || || |
Sbjct 355 ATATTCTCTTAGACTTAGTTGGGTGTAACGCATACTTAATAGCCTGACCAACTGTATCCT 414
Query 68522 CGATGGCTGCGATGACGGTTGGCGAGCGAGCATCTTCGTCCGAAACCAAGTCATCCAGTA 68581
|| | | || | || || || | | |||||||| |||||||||||||| ||
Sbjct 415 TAATAGATTGAATAGCAGTAGGTGATCTTGAATCTTCGTTACTAACCAAGTCATCCATTA 474
Query 68582 CCGCAAGCTGCGGTCGCTTACCCATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 68639
||| |||||| ||| |||| || || |||||| ||||||| ||| |||||
Sbjct 475 TACCAATCTGCGGACGCATACCATATTCTTTAAAACCACGAACACCAGACTTAGCACC 532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 231913125480680
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