Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031114.1 Length=39235 Score E Sequences producing significant alignments: (Bits) Value seq512931 132 1e-26 seq515320 105 2e-18 >seq512931 Length=538 Score = 132 bits (146), Expect = 1e-26 Identities = 356/533 (67%), Gaps = 30/533 (6%) Strand=Plus/Plus Query 37149 CCTGACCACT-CTCCTAGTGTGAAATCAGTAGGTATCACTGGTCAGT-TAACTGGTAGCC 37206 ||||||||| | ||| | ||||| || || ||| | ||||| | || | |||||||||| Sbjct 10 CCTGACCACAGCCCCTCG-GTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCC 67 Query 37207 GTGCTGACATTATCATTGCGGATGACGTTGAGATTCCGTCTAACAGTGCAACTATGGGTG 37266 |||||||||| |||||||||||||||||||| | || ||| || || | | Sbjct 68 GTGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCG 127 Query 37267 CCCGTGAGAAGCTATGGACTCTCGTTCAGGAGTTCGCTGCGTTACTTAAACCGCTGCCTT 37326 | | || | || | || || |||| |||| |||| | || || |||| Sbjct 128 CAAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAA------GCCTG 181 Query 37327 CCTCTCGCGTTATCTACCTTGGTACACCTCAGACAGAGATGACTCTCTATAAGGAACTTG 37386 | | | |||||| | || || || ||||| || ||||| ||||| | |||||||| Sbjct 182 ACGGTACGATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241 Query 37387 AGGATAACCGTGGGTACACAACCATTATCTGGCCTGCCCTGTACCCAAGG-ACGCG--TG 37443 |||| ||| || ||| | || | ||||||||||| | ||||| || | | | || Sbjct 242 AGGA---CCGCGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTG 298 Query 37444 AA---GAGAACCTCTATTACTCACAGCGTCTTGCTCCTATGTTACGCGCTGAGTATGATG 37500 | ||| | || || | || | | || | | || | || | ||| | Sbjct 299 ACCTTGAGTCCTACTGGCACGCCAAGGG-CAAGCGCTCACGTCTGGACCTTACCATGCTC 357 Query 37501 A-GAACCCTGAGGCCCTCG-----CTG----GGACTCCTACAGACCCTGTTCGCTTTGAC 37550 | | | | || | | || ||| ||| |||||||||||| |||| || || Sbjct 358 AAGGAGCTGGAAGACGACGAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGAT 417 Query 37551 CGTGATGACCTCCGTGAGCGTGAGTTGGAATACGGCAAGGCTGGCTTCACACTACAGTTC 37610 ||| ||||| |||||||| || | ||| ||||||| ||||||| | ||||||||| Sbjct 418 GATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTC 477 Query 37611 ATGCTTAACCCGAACCTGAGTGATGCCGAGAAGTACCCTCTGAGGCTCCGTGA 37663 ||||| ||||||||||| || || |||||||||||| ||| ||| ||||| Sbjct 478 ATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 >seq515320 Length=237 Score = 105 bits (116), Expect = 2e-18 Identities = 129/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 12634 CTACGTGGTTCTGGCGCACTACGCCAACTATCTGATACTATTATTGCCCTTGAGCGTAAT 12693 || |||||||| || || | ||||| || |||||| |||| ||| ||||| | ||| Sbjct 16 CTTCGTGGTTCAGGTTCAATTGCTCAACTCTCAGATACTGTTATAGCCTTTGAGAGGAAT 75 Query 12694 CAGCAAGGTGATATGCCTAACCTTGTCCTCGTTCGTATTCTCAAGTGCCGCTTTACTGGT 12753 |||||||| | |||||| ||| | | | || | ||||| |||||||| ||| Sbjct 76 CAGCAAGGGAGCAGTCCTAACAAGGTCTTGATAAGAATCTTAAAGTGTCGCTTTACAGGT 135 Query 12754 G-ATACTGGTATCGCTGGCTACATGGAATACAACAAGGAAACCGGATGGCTTGAA 12807 | | |||||||| || |||||| || | ||||| ||||||| |||||||||||| Sbjct 136 GAAAACTGGTATAGCAGGCTACTTGAATTACAATCAGGAAACTGGATGGCTTGAA 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124647672128028