Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq434791 122 3e-23
seq512506 111 6e-20
seq510726 93.3 2e-14
>seq434791
Length=745
Score = 122 bits (134), Expect = 3e-23
Identities = 178/252 (71%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 52074 ATTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACA 52133
||||| |||| ||||||| ||||| ||| | | ||| || | || || |||||
Sbjct 492 ATTGTGTCTGGTTGGAATCCCGGTGAAGCAGATCAAGTTGCGCTGCCGCCTTGTCATACG 551
Query 52134 CTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCC 52193
||||| || |||| ||| || || ||| || || ||||| | |||||||| || ||
Sbjct 552 CTATTTCAGTTCTTTGTGGCGGATAATAAACTGTCATGCCAGCTCTATCAGCGTTCAGCA 611
Query 52194 GACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATT 52253
|| | ||| | || || ||||||||||||||||||||| || | || || ||| || |
Sbjct 612 GATTTATTCCTAGGTGTGCCGTTTAACATTGCCAGCTATGCCCTACTTACCCATATGGTC 671
Query 52254 GCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATC 52313
|| | | ||| || || || || |||||||| ||||| ||||| || ||| ||
Sbjct 672 GCGCAAATTTGTGGTCTAGAAGTGGGGGAATTCATCTGGACAGGTGGTGATTGCCACATT 731
Query 52314 TACAACAACCAT 52325
|| | ||||||
Sbjct 732 TATCAAAACCAT 743
>seq512506
Length=396
Score = 111 bits (122), Expect = 6e-20
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 52113 GCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGC 52172
|| ||| |||| ||||| | | || || || ||||||||||| || || | |||||
Sbjct 256 GCCTTGCCTCCTTGCCACGCCTTTTTTCAGTTTTATGTAGCTGAGGGGAAATTATCGTGT 197
Query 52173 CATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTAT 52232
|| ||||| || || |||||| || |||||||| ||||| ||||||||||| |||
Sbjct 196 CAATTGTACCAACGAAGTGCCGATATTTTCTTGGGAGTTCCCTTTAACATTGCTTCTTAT 137
Query 52233 TCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATTTGG 52292
| || ||||| ||||||| | || | | | || || || |||||||||
Sbjct 136 GCTTTATTGACGATGATGATTGCGCAAGTGTGTAACTTAGAAGTAGGCGAATTCATTCAC 77
Query 52293 ACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCA 52333
||| ||| |||| ||||| |||||||||||| | || ||
Sbjct 76 ACTTTTGGTGACGCACATATTTACAACAACCATTTTGAACA 36
>seq510726
Length=706
Score = 93.3 bits (102), Expect = 2e-14
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 52109 TATGGCGTTGGCTCCCTGCCA-TACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTT 52167
|||||| || ||||| || || || || ||| ||| ||||||||| || ||||| | |
Sbjct 356 TATGGCTTTAGCTCCTTGTCACTATTCTTTTC-AATGCTATGTAGCAGACGGTAAATTAT 414
Query 52168 CGTGCCATTTGTA-TCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226
| | ||| || ||| || || || || |||||||| || ||||| ||||||||||||
Sbjct 415 C-TATGATTGTTAATCAACGATCAGCAGATATGTTCTTAGGTGTTCCATTTAACATTGCC 473
Query 52227 AGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTC 52286
|||| |||| || || ||| || | |||| | | | || || || || || |
Sbjct 474 TCCTATGCCTTACTTACTCATATGTTAGCTCAAATATGTAATCTAGAAGTAGGAGAGCTT 533
Query 52287 ATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCAGGTTA 52338
|| |||| ||||| || |||||||| |||||| | ||||| ||||
Sbjct 534 ATCTGGAGAGGTGGAGATTGTCATATCTATTTAAACCATATTGATCAAGTTA 585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 188909737040220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |