Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq434791 122 3e-23 seq512506 111 6e-20 seq510726 93.3 2e-14 >seq434791 Length=745 Score = 122 bits (134), Expect = 3e-23 Identities = 178/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 52074 ATTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCCCTGCCATACA 52133 ||||| |||| ||||||| ||||| ||| | | ||| || | || || ||||| Sbjct 492 ATTGTGTCTGGTTGGAATCCCGGTGAAGCAGATCAAGTTGCGCTGCCGCCTTGTCATACG 551 Query 52134 CTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCC 52193 ||||| || |||| ||| || || ||| || || ||||| | |||||||| || || Sbjct 552 CTATTTCAGTTCTTTGTGGCGGATAATAAACTGTCATGCCAGCTCTATCAGCGTTCAGCA 611 Query 52194 GACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATT 52253 || | ||| | || || ||||||||||||||||||||| || | || || ||| || | Sbjct 612 GATTTATTCCTAGGTGTGCCGTTTAACATTGCCAGCTATGCCCTACTTACCCATATGGTC 671 Query 52254 GCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATC 52313 || | | ||| || || || || |||||||| ||||| ||||| || ||| || Sbjct 672 GCGCAAATTTGTGGTCTAGAAGTGGGGGAATTCATCTGGACAGGTGGTGATTGCCACATT 731 Query 52314 TACAACAACCAT 52325 || | |||||| Sbjct 732 TATCAAAACCAT 743 >seq512506 Length=396 Score = 111 bits (122), Expect = 6e-20 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 52113 GCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGC 52172 || ||| |||| ||||| | | || || || ||||||||||| || || | ||||| Sbjct 256 GCCTTGCCTCCTTGCCACGCCTTTTTTCAGTTTTATGTAGCTGAGGGGAAATTATCGTGT 197 Query 52173 CATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTAT 52232 || ||||| || || |||||| || |||||||| ||||| ||||||||||| ||| Sbjct 196 CAATTGTACCAACGAAGTGCCGATATTTTCTTGGGAGTTCCCTTTAACATTGCTTCTTAT 137 Query 52233 TCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATTTGG 52292 | || ||||| ||||||| | || | | | || || || ||||||||| Sbjct 136 GCTTTATTGACGATGATGATTGCGCAAGTGTGTAACTTAGAAGTAGGCGAATTCATTCAC 77 Query 52293 ACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCA 52333 ||| ||| |||| ||||| |||||||||||| | || || Sbjct 76 ACTTTTGGTGACGCACATATTTACAACAACCATTTTGAACA 36 >seq510726 Length=706 Score = 93.3 bits (102), Expect = 2e-14 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 52109 TATGGCGTTGGCTCCCTGCCA-TACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTT 52167 |||||| || ||||| || || || || ||| ||| ||||||||| || ||||| | | Sbjct 356 TATGGCTTTAGCTCCTTGTCACTATTCTTTTC-AATGCTATGTAGCAGACGGTAAATTAT 414 Query 52168 CGTGCCATTTGTA-TCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCC 52226 | | ||| || ||| || || || || |||||||| || ||||| |||||||||||| Sbjct 415 C-TATGATTGTTAATCAACGATCAGCAGATATGTTCTTAGGTGTTCCATTTAACATTGCC 473 Query 52227 AGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTC 52286 |||| |||| || || ||| || | |||| | | | || || || || || | Sbjct 474 TCCTATGCCTTACTTACTCATATGTTAGCTCAAATATGTAATCTAGAAGTAGGAGAGCTT 533 Query 52287 ATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCAGGTTA 52338 || |||| ||||| || |||||||| |||||| | ||||| |||| Sbjct 534 ATCTGGAGAGGTGGAGATTGTCATATCTATTTAAACCATATTGATCAAGTTA 585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188909737040220