Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq509954 149 7e-31 >seq509954 Length=433 Score = 149 bits (164), Expect = 7e-31 Identities = 248/355 (70%), Gaps = 4/355 (1%) Strand=Plus/Plus Query 112572 TTGCTCAAGACCTGAAGGCGATTCATGGTTTGGATGCTGAGCAAGAGCTCGCTAACATCC 112631 ||||||| || |||| || | ||||| ||||| || || |||| || || || || | Sbjct 1 TTGCTCAGGATATGAAAGCTGTACATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTC 60 Query 112632 TCAGCACCGAAATCCTTGCTGAAATCAACCGTGAAGTTGTTCGTACCATCTATGTAAACG 112691 | || ||||| ||||| ||||| |||||||| | |||||||| | |||| || | Sbjct 61 TTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGTACCGTATATGCAACTG 120 Query 112692 CTGTTGCTGGTGCTCAGAACAACACTGCTACCCCTGGTATCTTCGACCTCGACGTTGACT 112751 | ||||||| || | | || | | ||||||||||||| | ||||| || Sbjct 121 CAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATG 180 Query 112752 CCAACGGTCGTTGGTCTGTTGAGAAGTTCAAGGGTCTGCTGTTCCAAATCGAGCGCGATG 112811 | || ||||| ||||| || || || ||||| || || |||||||||| || || |||| Sbjct 181 CAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTCCAAATTGAACGTGATG 240 Query 112812 CAAACGCAATCGGTCATGAGACTCGTCGCGGGAAGGGCAACATCCTCATCTGTTCTGCTG 112871 | ||| ||||| | | || || | || || || || ||| | | |||||||| ||| Sbjct 241 CTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTG 300 Query 112872 ACGTTGCTTCGGCACTCGGCATG--GCAGGCGTTCTGGATTACACCCCTGCTCTC 112924 |||| ||||| ||| | ||| || || || | || |||| | | |||||| || Sbjct 301 ACGTAGCTTCTGCA-TTGGC-TGCTGCTGGAATCCTTGATTTCGCACCTGCTATC 353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553991293718640