Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031258.1
Length=39696
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 199 1e-46
>seq512931
Length=538
Score = 199 bits (220), Expect = 1e-46
Identities = 367/524 (70%), Gaps = 42/524 (8%)
Strand=Plus/Plus
Query 36922 CCCGACCACTCACCCTCTGTGAAGTCTGTGGGTATTACTGGTCAGT-TGACTGGTAGCCG 36980
|| |||||| ||||| |||||||| |||||| ||||||| | || |||||||||||||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 36981 TGCTGACATTATCATTGCGGATGACGTTGAGGTTCCCGGCAACAGTTCTACAAGTTCTGC 37040
||||||||| |||||||||||||||||||||| ||||||||| | ||| || ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 37041 TCGTGAGAAGCTGTGGACA-CTGGTTACTGAGTTTGCTGCATTACTTAAGCCGTTGCCTA 37099
| || | || ||| | ||||| | || || | ||| | || ||||| || |
Sbjct 129 AAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG---A 182
Query 37100 CCTCTCGTGTTATCTACCTTGGGACACCTCAAACCGAGATGACTCTCTATAAGGAACTTG 37159
| || | |||||| | || || || || ||||| ||||| ||||| | ||||||||
Sbjct 183 CGGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241
Query 37160 AGGATAACAAAGGGTACAGCACAGTAATCTGGCCAGCACAGTATCCACGTAATG------ 37213
|||| | || ||| || |||||||| |||| || || || |||
Sbjct 242 AGGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTG 298
Query 37214 ------AGTCCGA--GGCTCTCTA----CTATGGCGACCGACTGGCTCCTA---TGCTCA 37258
||||| | ||| | | | | | || || |||| | || ||||||
Sbjct 299 ACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCA 358
Query 37259 AGCAAGAGTATGATGAAGGCTACGAGATTCT-TCGTGGACAACCTACTGACCCTGTTCGA 37317
|| ||| || |||| | |||||| || | |||| | ||||| |||||| |||||
Sbjct 359 AG---GAGC-TG--GAAGACGACGAGAAGCTGTTCTGGA-AGCCTACAGACCCTATTCGA 411
Query 37318 TTCGATATGGATGACCTCCGTGAACGTGAACTCGAATATGGCAAAGCTGGCTACACTCTT 37377
|||||| || ||||| ||||| || |||||| ||||||||| | ||||| | ||||
Sbjct 412 TTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTA 471
Query 37378 CAGTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTACCC 37421
||||||||||| |||||||||||||| || ||||||||||||
Sbjct 472 CAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126113666383992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |