Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031258.1 Length=39696 Score E Sequences producing significant alignments: (Bits) Value seq512931 199 1e-46 >seq512931 Length=538 Score = 199 bits (220), Expect = 1e-46 Identities = 367/524 (70%), Gaps = 42/524 (8%) Strand=Plus/Plus Query 36922 CCCGACCACTCACCCTCTGTGAAGTCTGTGGGTATTACTGGTCAGT-TGACTGGTAGCCG 36980 || |||||| ||||| |||||||| |||||| ||||||| | || ||||||||||||| Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 36981 TGCTGACATTATCATTGCGGATGACGTTGAGGTTCCCGGCAACAGTTCTACAAGTTCTGC 37040 ||||||||| |||||||||||||||||||||| ||||||||| | ||| || || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 37041 TCGTGAGAAGCTGTGGACA-CTGGTTACTGAGTTTGCTGCATTACTTAAGCCGTTGCCTA 37099 | || | || ||| | ||||| | || || | ||| | || ||||| || | Sbjct 129 AAGGGATCACCT-TGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCC--TG---A 182 Query 37100 CCTCTCGTGTTATCTACCTTGGGACACCTCAAACCGAGATGACTCTCTATAAGGAACTTG 37159 | || | |||||| | || || || || ||||| ||||| ||||| | |||||||| Sbjct 183 CGGTACGA-TCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTG 241 Query 37160 AGGATAACAAAGGGTACAGCACAGTAATCTGGCCAGCACAGTATCCACGTAATG------ 37213 |||| | || ||| || |||||||| |||| || || || ||| Sbjct 242 AGGACCGC---GGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTG 298 Query 37214 ------AGTCCGA--GGCTCTCTA----CTATGGCGACCGACTGGCTCCTA---TGCTCA 37258 ||||| | ||| | | | | | || || |||| | || |||||| Sbjct 299 ACCTTGAGTCCTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCA 358 Query 37259 AGCAAGAGTATGATGAAGGCTACGAGATTCT-TCGTGGACAACCTACTGACCCTGTTCGA 37317 || ||| || |||| | |||||| || | |||| | ||||| |||||| ||||| Sbjct 359 AG---GAGC-TG--GAAGACGACGAGAAGCTGTTCTGGA-AGCCTACAGACCCTATTCGA 411 Query 37318 TTCGATATGGATGACCTCCGTGAACGTGAACTCGAATATGGCAAAGCTGGCTACACTCTT 37377 |||||| || ||||| ||||| || |||||| ||||||||| | ||||| | |||| Sbjct 412 TTCGATGATGAAGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTA 471 Query 37378 CAGTTCATGCTTAACCCGAACCTTAGTGATGCCGAGAAGTACCC 37421 ||||||||||| |||||||||||||| || |||||||||||| Sbjct 472 CAGTTCATGCTCAACCCGAACCTTAGCGACATCGAGAAGTACCC 515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126113666383992