Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031271.1 Length=43602 Score E Sequences producing significant alignments: (Bits) Value seq494738 141 3e-29 seq502596 95.1 3e-15 >seq494738 Length=508 Score = 141 bits (156), Expect = 3e-29 Identities = 207/290 (71%), Gaps = 12/290 (4%) Strand=Plus/Plus Query 36540 TTGCGTGGTAGC-GACAAGTCTCCATCCGTTGCTTGCTACTCTATTGAAGCAGGTATGCA 36598 || ||||| ||| |||||||||||||||||| |||| |||||||| || |||| || Sbjct 82 TTCCGTGG-AGCTGACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACA 140 Query 36599 GGGTGCGCGTGCAGATATCATCTTGGCGGATGACGTAGAGTCGTTGCAGAACTCTCGTAC 36658 ||| || ||||| ||||| || | || ||||| | ||||| || |||||||||||| | Sbjct 141 GGGCGCTCGTGCTGATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTC 200 Query 36659 TGCCGCAGGTCGTGCTCTCTT-----AGAAGACCTTACCAAGGAATTTGAATCAATCAAC 36713 | || || |||| || || |||||||| || || || || |||||| Sbjct 201 AGTTGCTGGCCGTGAATGGTTGATGGAGCAGACCTTA-----GAGTTCGAGTCTATCAAC 255 Query 36714 CAGTTCGGTGATATCATCTACTTGGGGACACCTCAAAGCGTAAACTCCATATACAACAAC 36773 || || ||| |||| || ||||| || ||||| || ||||| | || || |||||| Sbjct 256 CAATTTGGTCATATTATATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGG 315 Query 36774 CTCCCGGCACGTGGTTATCAGATTCGCATCTGGCCCGGTCGCTATCCTAC 36823 || || ||||| || || |||| |||||| | ||| | || ||||| Sbjct 316 CTGCCTAGTCGTGGCTACAAGGTTCGTATCTGGACAGGTAGATACCCTAC 365 >seq502596 Length=783 Score = 95.1 bits (104), Expect = 3e-15 Identities = 98/127 (77%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 18402 TATGACTTAACATGCATTGGTTGGGAAGAAGGGAAAGGTAAATACAAAGGTAAGGTAGCT 18461 ||||||||| || ||||| | || ||||| | ||||| || ||||| ||||||||| Sbjct 345 TATGACTTACTTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGCT 404 Query 18462 AATCTTATCTTTAAATGGAAGGGTGGCAAGAAAATCAAGGCTATGCTTGGTCGTGGTTGG 18521 ||||| | ||||| ||||| ||| ||| | ||||| ||||||||||| | |||||| Sbjct 405 AATCTGCTGTTTAAGTGGAAAGGTAACAAAACCATCAAAGCTATGCTTGG-CAGGGTTGG 463 Query 18522 ACACATG 18528 || |||| Sbjct 464 ACTCATG 470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138534867173136