Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031271.1
Length=43602
Score E
Sequences producing significant alignments: (Bits) Value
seq494738 141 3e-29
seq502596 95.1 3e-15
>seq494738
Length=508
Score = 141 bits (156), Expect = 3e-29
Identities = 207/290 (71%), Gaps = 12/290 (4%)
Strand=Plus/Plus
Query 36540 TTGCGTGGTAGC-GACAAGTCTCCATCCGTTGCTTGCTACTCTATTGAAGCAGGTATGCA 36598
|| ||||| ||| |||||||||||||||||| |||| |||||||| || |||| ||
Sbjct 82 TTCCGTGG-AGCTGACAAGTCTCCATCCGTTCCTTGTTACTCTATCGAGTCAGGAGCACA 140
Query 36599 GGGTGCGCGTGCAGATATCATCTTGGCGGATGACGTAGAGTCGTTGCAGAACTCTCGTAC 36658
||| || ||||| ||||| || | || ||||| | ||||| || |||||||||||| |
Sbjct 141 GGGCGCTCGTGCTGATATAATAATTGCAGATGATATTGAGTCCTTACAGAACTCTCGTTC 200
Query 36659 TGCCGCAGGTCGTGCTCTCTT-----AGAAGACCTTACCAAGGAATTTGAATCAATCAAC 36713
| || || |||| || || |||||||| || || || || ||||||
Sbjct 201 AGTTGCTGGCCGTGAATGGTTGATGGAGCAGACCTTA-----GAGTTCGAGTCTATCAAC 255
Query 36714 CAGTTCGGTGATATCATCTACTTGGGGACACCTCAAAGCGTAAACTCCATATACAACAAC 36773
|| || ||| |||| || ||||| || ||||| || ||||| | || || ||||||
Sbjct 256 CAATTTGGTCATATTATATACTTAGGCACACCACAGAGCGTGGAGTCTATCTACAACTGG 315
Query 36774 CTCCCGGCACGTGGTTATCAGATTCGCATCTGGCCCGGTCGCTATCCTAC 36823
|| || ||||| || || |||| |||||| | ||| | || |||||
Sbjct 316 CTGCCTAGTCGTGGCTACAAGGTTCGTATCTGGACAGGTAGATACCCTAC 365
>seq502596
Length=783
Score = 95.1 bits (104), Expect = 3e-15
Identities = 98/127 (77%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 18402 TATGACTTAACATGCATTGGTTGGGAAGAAGGGAAAGGTAAATACAAAGGTAAGGTAGCT 18461
||||||||| || ||||| | || ||||| | ||||| || ||||| |||||||||
Sbjct 345 TATGACTTACTTTGTATTGGCTATGAGGAAGGCACTGGTAAGTATAAAGGCAAGGTAGCT 404
Query 18462 AATCTTATCTTTAAATGGAAGGGTGGCAAGAAAATCAAGGCTATGCTTGGTCGTGGTTGG 18521
||||| | ||||| ||||| ||| ||| | ||||| ||||||||||| | ||||||
Sbjct 405 AATCTGCTGTTTAAGTGGAAAGGTAACAAAACCATCAAAGCTATGCTTGG-CAGGGTTGG 463
Query 18522 ACACATG 18528
|| ||||
Sbjct 464 ACTCATG 470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138534867173136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |