Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 122 2e-22
seq152718 111 4e-19
seq6427 104 5e-17
seq59939 91.5 3e-13
seq388653 89.7 1e-12
>seq152719
Length=2073
Score = 122 bits (134), Expect = 2e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| ||||||| |||||||| ||||||||||| |||| | ||| | || |||||
Sbjct 289 GACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCTTC 348
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| || ||||| ||||| |||||||||||||| | | ||| |||||||| || ||
Sbjct 349 CAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCCTTATCCTG 408
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || ||||||| |||| | | |||| || || | ||||| ||||| ||
Sbjct 409 GATCTTAGCTTTGACATTCTCAATGGTGTCGTTGGGTTCAACCACCAGAGTGATAGTCTT 468
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| ||||| |||||||| |||| ||| ||
Sbjct 469 GCCTGTGAGGGTCTTCACAAAGATCTGAAT 498
Score = 120 bits (132), Expect = 7e-22
Identities = 159/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || | ||| |||||||| || || |||||||| ||||||||||| |||| | |||
Sbjct 50 CTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTG 109
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| || ||||| || || ||||| ||||| ||||||||||| || | | ||| ||
Sbjct 110 CGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCC 169
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || ||||||| |||| | | |||| || || || |||
Sbjct 170 TCCTTATCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGA 229
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || | || || || || |||||||| |||| ||||||
Sbjct 230 GTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| | || || ||||| |||||||| ||||| | | || | ||||||
Sbjct 515 AGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCTGACATGGTGCGACCATCT 574
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||| ||||| ||||||||||| || | | ||| || ||||| ||
Sbjct 575 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCCTCCTTATCC 634
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||| ||| |||| | | |||| || || || ||||| |||||
Sbjct 635 TGGATCTTAGCTTTTACATTCTCAATGGTGTCGCTGGGTTCAACCTCCAGAGTGATAGTC 694
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || |||||||| |||| |||||| ||
Sbjct 695 TTACCAGTCAGGGTCTTCACAAAGATCTGCATCTT 729
>seq152718
Length=3078
Score = 111 bits (122), Expect = 4e-19
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| ||||| || ||||||||||| |||||| |||| |||| | ||| | | |||||
Sbjct 2392 GACCAGATGGAGGGTAGACTCTTTCTGGATGCTGTATTCGGAGAGAGTGCGGCTGTCTTC 2451
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| || ||| | ||| | |||||||||||||| | | || ||||||||| |||||
Sbjct 2452 CAGCAGCTTGCCGCCAAAGTTGAGCCTCTGCTGGTCTGTAGGGAATCCTTCCTTATCTTG 2511
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGT 152071
|| || ||||| | | || | | |||| ||| || || || |||| |||||
Sbjct 2512 GATCTTGGCTTTGAAATTATCAATGGTGTC---ACTGGGTTCAACCTCCAGAGCTATAGT 2568
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| |||||||| |||| ||| ||
Sbjct 2569 CTTCCCTGTGAGGGTCTTCACAAAGATCTGAAT 2601
>seq6427
Length=3314
Score = 104 bits (114), Expect = 5e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| || | |||||||||||| || || ||||| || ||||||||||| |||| | ||
Sbjct 3114 CTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 3173
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || || ||||| ||||| ||||||||||| || | | || |||
Sbjct 3174 CGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCT 3233
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || |||||| | || | | |||| ||| || || ||
Sbjct 3234 TCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCGCTGGGCTCAACCTCCAGG 3293
Query 152064 GTAATAGTTTTGCCCGTGAG 152083
|| || || |||||||||||
Sbjct 3294 GTGATGGTCTTGCCCGTGAG 3313
>seq59939
Length=800
Score = 91.5 bits (100), Expect = 3e-13
Identities = 119/163 (73%), Gaps = 4/163 (2%)
Strand=Plus/Plus
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|||||||| || ||||| ||||| ||||| ||||||||||| || | | || ||||
Sbjct 8 CCATCTTCCAGCTGCTTT--CCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTT 65
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || || || || |||||| | || | |||| | ||| || || || |
Sbjct 66 CCTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGG 125
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || || ||||||||||| |||||||| |||| |||||| ||
Sbjct 126 TGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 168
>seq388653
Length=382
Score = 89.7 bits (98), Expect = 1e-12
Identities = 125/173 (72%), Gaps = 2/173 (1%)
Strand=Plus/Plus
Query 115611 ATGAGGGCAAGGGAGATTTTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTC 115670
||| | ||||| || | |||| |||||| ||||| |||||| | || ||||| || ||
Sbjct 16 ATGCGTGCAAGAGATTTATTCTTTGCCATGTGGACTTCTGATTTATTCATGAAACGTGTA 75
Query 115671 AAGGCAAACGGAATGTGGAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTT 115730
| | | |||||| |||| | | ||||| || ||| ||||| | | ||||||
Sbjct 76 CAAGAAGACGGAAACTGGACTTTAATGTGTCCTAACGAATGTCCTGGATTGTACGATGTT 135
Query 115731 TATGGTCCAGAGTTTG-AGAATCTTTACGAAAGGTACGAGAAAGAGGGAAGAG 115782
|||||| |||||||| || || | || ||||| |||||||||| |||| ||
Sbjct 136 TATGGTGAAGAGTTTGAAGCAT-TATATGAAAGCTACGAGAAAGCTGGAAAAG 187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1146052131043842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |