Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031928.1
Length=169936
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 183 3e-41
seq509673 125 8e-24
>seq449735
Length=3187
Score = 183 bits (202), Expect = 3e-41
Identities = 484/733 (66%), Gaps = 11/733 (2%)
Strand=Plus/Minus
Query 143054 TAGTTGGGATAGCAATTTCACAACACAAGTTGCTCTGGCGAATAGGAGCTTTCTCACGAA 143113
||||||| | |||||||| |||| || || ||||||||||| || | | ||
Sbjct 754 TAGTTGGTAATGCAATTTCTAAACATAAATTAGATTGGCGAATAGGTGCCACTTTAGCAA 695
Query 143114 TAAATGGTGTGAAGTTGTTAGTGTTATCAACGAATTGAGGATAAATTCGTGCAGTGCCTG 143173
| || || || | ||| || |||||| ||| ||||| || | || | ||
Sbjct 694 TGAACGGGCTGTGCGTATTACAGTGGTCAACGTTTTGTAAGTAAATACGACCGGTACTTG 635
Query 143174 AACGTTCAGTCATGAACAATTCAAAGAGGTCACGTGCCTTAATACGTTTCTTACGAATAC 143233
|||||| | |||| | || || ||| || ||||| ||||| ||||||||
Sbjct 634 CACGTTCTTGCGCAAACATTGAGAACAGTTCAATAGCTTTAATGCGTTTTTTACGAATTG 575
Query 143234 TAGGGTCTTTTTCTGCGGCTTCATACAATTCACGG-AAACG-GTCTTGGTCTTCGAAATA 143291
||||| ||| | |||| | | || |||| |||||||||||| ||| |
Sbjct 574 ATTCGTCTTGTTCGTATTTTACATAAAG--CGCGTCAAACTCGTCTTGGTCTTCAAAAAA 517
Query 143292 AGAATAGTAAAGCTCACCACCCATTTCATGAGGACTAAACAGAGTAATGTAATCATTCTT 143351
| || |||||| || || ||| || ||||||| |||||||| || | ||
Sbjct 516 TGCATCGTAAAGG---CCTGGCACATCAGAGGGGCTAAACAAGGTAATGTAGTCGTCTTT 460
Query 143352 ACCGAAACGTTCCATCATCAGGTCGTTCAACTGGATTCCATAGTCCATATGACGAATACG 143411
| ||||| ||| || | || ||||| | || || || | |||||| | ||
Sbjct 459 AATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTAATCTAAATGACGCACGCG 400
Query 143412 GTTCTCATCGACACCCTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCA 143471
||| ||||| || || ||| ||||| || || | ||| ||||| ||||| ||||||||
Sbjct 399 GTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTTTTCTACTTCTAAATGCCA 340
Query 143472 AATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTA 143529
|| || || | ||| || || ||||||||||| | || ||||| ||||| ||||
Sbjct 339 AAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCGCCTTGCGAACAGCTTTTA 282
Query 143530 ACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATG 143589
|| || || || || || || | || |||||| ||| ||||| | ||||||| ||
Sbjct 281 ACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTATGGTACGCTTCGCCATTG 222
Query 143590 CCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTA 143649
| ||| | ||| |||||||| ||| |||| || ||||| ||||||||||
Sbjct 221 CGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATGCCAATGCCGGCACGTTGC 162
Query 143650 GAAATGTATTCAATTATTGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCT 143709
|| | ||||| || |||| | || |||||| || | || ||||||
Sbjct 161 GATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAATCAAGGCTGTCGCCACAC 102
Query 143710 TCAATAACCACACAAGAACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGA 143769
|| || | ||||| || ||||| || || ||||| ||||| | || |||||||| ||
Sbjct 101 TCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGAACACCTGCCATAATTGGC 42
Query 143770 GTTGGTAATGAAA 143782
|| |||| |||||
Sbjct 41 GTAGGTAGTGAAA 29
>seq509673
Length=441
Score = 125 bits (138), Expect = 8e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 143377 TTCAACTGGATTCCATAGTCCATATGACGAATACGGTTCTCATCGACACCCTTGTTGTTT 143436
|| ||||| | || || ||||||||||| | |||||| || || || || ||| |||
Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281
Query 143437 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 143496
||||| || | | |||||||| |||||||| | || ||| | || || ||
Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341
Query 143497 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 143556
|||||||||| || |||||||| || ||||||||||||| ||||| |||| |||||
Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401
Query 143557 GGAATAACACCGGTATGCTTGACTTCGCC 143585
|| ||| ||| ||||||| |||||||
Sbjct 402 GGGATACAACCCGTATGCTGCGCTTCGCC 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540095972488320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |