Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031934.1
Length=168929
Score E
Sequences producing significant alignments: (Bits) Value
seq449735 179 4e-40
seq509673 129 6e-25
>seq449735
Length=3187
Score = 179 bits (198), Expect = 4e-40
Identities = 348/511 (68%), Gaps = 7/511 (1%)
Strand=Plus/Minus
Query 142355 GTCTTGGTCTTCGAAATAAGAATAATAAAGCTCACCACTCATTTCATGAGGACTAAACAG 142414
|||||||||||| ||| | | || ||||| || || ||| || |||||||
Sbjct 534 GTCTTGGTCTTCAAAAAATGCATCGTAAAGG---CCTGGCACATCAGAGGGGCTAAACAA 478
Query 142415 GGTAATATAATCATTTTTACCGAAACGTTCCATCATCAGGTCGTTCAACTGGATTCCGTA 142474
|||||| || || | |||| ||||| ||| || | || ||||| | |||||
Sbjct 477 GGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTA 418
Query 142475 GTCCATATGACGAATACGGTTCTCATCGACACCCTTGTTGTTTTTCAGAACGAGCAGATT 142534
|| | |||||| | ||||| ||||| || || ||| ||||| || || | ||| ||
Sbjct 417 ATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTT 358
Query 142535 TTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCA 142592
||| ||||| |||||||||| || || | ||| || || ||||||||||| | ||
Sbjct 357 TTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCG 300
Query 142593 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTA 142652
||||| ||||| |||||| || || || || || || | || |||||| ||| |||
Sbjct 299 CCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTA 240
Query 142653 TGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATA 142712
|| | ||||||| ||| ||| | ||| |||||||| ||| |||| ||
Sbjct 239 TGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATG 180
Query 142713 CCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTAGCAGTTTTGTTAATAGAT 142772
||||| || ||||||| || | ||||| || |||| | || |||||| ||
Sbjct 179 CCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAA 120
Query 142773 TTCAGCGAGTCGCCGGCTTCAATAACCACACAAGAACTAAATTGACGGGTTGGTGTACGT 142832
| || |||||| || || | ||||| || ||||| || || ||||| |||||
Sbjct 119 TCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGA 60
Query 142833 GCTCCAGCCATAATAGGAGTAGGCAATGAAA 142863
| || |||||||| || ||||| | |||||
Sbjct 59 ACACCTGCCATAATTGGCGTAGGTAGTGAAA 29
>seq509673
Length=441
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 142458 TTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACCCTTGTTGTTT 142517
|| ||||| | ||||| ||||||||||| | |||||| || || || || ||| |||
Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281
Query 142518 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 142577
||||| || | | |||||||| |||||||| | || ||| | || || ||
Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341
Query 142578 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 142637
|||||||||| || |||||||| || ||||||||||||| ||||| |||| |||||
Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401
Query 142638 GGAATAACACCGGTATGCTTGACTTCGCC 142666
|| ||| ||| ||||||| |||||||
Sbjct 402 GGGATACAACCCGTATGCTGCGCTTCGCC 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536894739708880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |