Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq449735 179 4e-40 seq509673 129 6e-25 >seq449735 Length=3187 Score = 179 bits (198), Expect = 4e-40 Identities = 348/511 (68%), Gaps = 7/511 (1%) Strand=Plus/Minus Query 142355 GTCTTGGTCTTCGAAATAAGAATAATAAAGCTCACCACTCATTTCATGAGGACTAAACAG 142414 |||||||||||| ||| | | || ||||| || || ||| || ||||||| Sbjct 534 GTCTTGGTCTTCAAAAAATGCATCGTAAAGG---CCTGGCACATCAGAGGGGCTAAACAA 478 Query 142415 GGTAATATAATCATTTTTACCGAAACGTTCCATCATCAGGTCGTTCAACTGGATTCCGTA 142474 |||||| || || | |||| ||||| ||| || | || ||||| | ||||| Sbjct 477 GGTAATGTAGTCGTCTTTAATTAAACGCGAGTACATTAGTTTATTAAACTGTACGCCGTA 418 Query 142475 GTCCATATGACGAATACGGTTCTCATCGACACCCTTGTTGTTTTTCAGAACGAGCAGATT 142534 || | |||||| | ||||| ||||| || || ||| ||||| || || | ||| || Sbjct 417 ATCTAAATGACGCACGCGGTTGTCATCAACCCCGCGGTTATTTTTAAGTACTAACAGGTT 358 Query 142535 TTCAACTTCCAAATGCCAAATAGGATA--ATAAGCAGTAGCAGCGCCGCCACGGATTCCA 142592 ||| ||||| |||||||||| || || | ||| || || ||||||||||| | || Sbjct 357 TTCTACTTCTAAATGCCAAAGCGGGTAGAACAAG--GTTGCTGCGCCGCCACGTACACCG 300 Query 142593 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTA 142652 ||||| ||||| |||||| || || || || || || | || |||||| ||| ||| Sbjct 299 CCTTGCGAACAGCTTTTAACCGCTGTTTGAAAGTGCTTATAAAAAGGAATACAACCCGTA 240 Query 142653 TGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATA 142712 || | ||||||| ||| ||| | ||| |||||||| ||| |||| || Sbjct 239 TGGTACGCTTCGCCATTGCGAATGTGGCTACCCAGTGCACGAATGCGACCTGCGTTAATG 180 Query 142713 CCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTAGCAGTTTTGTTAATAGAT 142772 ||||| || ||||||| || | ||||| || |||| | || |||||| || Sbjct 179 CCAATGCCGGCACGTTGCGATACGTATTTAACAATTGCAGACGAGGTGGCGTTAATTGAA 120 Query 142773 TTCAGCGAGTCGCCGGCTTCAATAACCACACAAGAACTAAATTGACGGGTTGGTGTACGT 142832 | || |||||| || || | ||||| || ||||| || || ||||| ||||| Sbjct 119 TCAAGGCTGTCGCCACACTCTATTAATACACACGAGCTAAACTGGCGTGTTGGCGTACGA 60 Query 142833 GCTCCAGCCATAATAGGAGTAGGCAATGAAA 142863 | || |||||||| || ||||| | ||||| Sbjct 59 ACACCTGCCATAATTGGCGTAGGTAGTGAAA 29 >seq509673 Length=441 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 142458 TTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACCCTTGTTGTTT 142517 || ||||| | ||||| ||||||||||| | |||||| || || || || ||| ||| Sbjct 222 TTTAACTGTACGCCGTAATCCATATGACGGACACGGTTGTCTTCCACGCCGCGGTTATTT 281 Query 142518 TTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 142577 ||||| || | | |||||||| |||||||| | || ||| | || || || Sbjct 282 TTCAGTACCAATAATGACTCAACTTCTAAATGCCATAATGGGTAAAACAACGTCGCTGCA 341 Query 142578 CCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAAT 142637 |||||||||| || |||||||| || ||||||||||||| ||||| |||| ||||| Sbjct 342 CCGCCACGGACGCCGCCTTGTGAGCAGCATTTAACAGCAGTTTGGAACAGTTTATAGAAT 401 Query 142638 GGAATAACACCGGTATGCTTGACTTCGCC 142666 || ||| ||| ||||||| ||||||| Sbjct 402 GGGATACAACCCGTATGCTGCGCTTCGCC 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536894739708880