Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 113 5e-20
>seq509954
Length=433
Score = 113 bits (124), Expect = 5e-20
Identities = 187/276 (68%), Gaps = 0/276 (0%)
Strand=Plus/Plus
Query 117188 GAACTCGCTAACCTTCTTTCCAGCGAGATCCTTGCTGAAATCAACCGCGAAGTTGTAAGA 117247
||||| || || ||||||| | || || ||||| ||||| ||||| || | | |
Sbjct 45 GAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGT 104
Query 117248 ACCGTTTACACCGTTGCTAAGCCTGGTGCTCAGAACNNNNNNNNNNNNNNNNNTATCTTC 117307
||||| || | ||| || |||||||| || | |||||||
Sbjct 105 ACCGTATATGCAACTGCAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTC 164
Query 117308 GACCTCGACGTTGATTCAAACGGACGTTGGTCAGTTGAGAAGTTCAAGGGTCTAATGTTC 117367
|| | ||||| ||| |||| || || |||||||| || || ||||| || || ||||||
Sbjct 165 GATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTC 224
Query 117368 CAGATCGAGCGTGATGCTAACGCTATCGCTCAGCAAACTCGTAGAGGAAAGGGCAACTTC 117427
|| || || |||||||||||| |||||| | |||| | | || || || |||||
Sbjct 225 CAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTT 284
Query 117428 ATCATCACTTCTGCTGATGTTGCTTCTGCACTCGCT 117463
|| ||| ||| |||| || ||||||||| | |||
Sbjct 285 ATTATCTGTTCATCTGACGTAGCTTCTGCATTGGCT 320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592390192172320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |