Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq509954 113 5e-20 >seq509954 Length=433 Score = 113 bits (124), Expect = 5e-20 Identities = 187/276 (68%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 117188 GAACTCGCTAACCTTCTTTCCAGCGAGATCCTTGCTGAAATCAACCGCGAAGTTGTAAGA 117247 ||||| || || ||||||| | || || ||||| ||||| ||||| || | | | Sbjct 45 GAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGTGAGCTAATTCGT 104 Query 117248 ACCGTTTACACCGTTGCTAAGCCTGGTGCTCAGAACNNNNNNNNNNNNNNNNNTATCTTC 117307 ||||| || | ||| || |||||||| || | ||||||| Sbjct 105 ACCGTATATGCAACTGCAAAACCTGGTGCACAAACTGGTTCAGCAAACGCTGGTATCTTC 164 Query 117308 GACCTCGACGTTGATTCAAACGGACGTTGGTCAGTTGAGAAGTTCAAGGGTCTAATGTTC 117367 || | ||||| ||| |||| || || |||||||| || || ||||| || || |||||| Sbjct 165 GATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAGGACTTATGTTC 224 Query 117368 CAGATCGAGCGTGATGCTAACGCTATCGCTCAGCAAACTCGTAGAGGAAAGGGCAACTTC 117427 || || || |||||||||||| |||||| | |||| | | || || || ||||| Sbjct 225 CAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTAAAGGTAACTTT 284 Query 117428 ATCATCACTTCTGCTGATGTTGCTTCTGCACTCGCT 117463 || ||| ||| |||| || ||||||||| | ||| Sbjct 285 ATTATCTGTTCATCTGACGTAGCTTCTGCATTGGCT 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592390192172320