Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031937.1 Length=38979 Score E Sequences producing significant alignments: (Bits) Value seq512931 226 7e-55 >seq512931 Length=538 Score = 226 bits (250), Expect = 7e-55 Identities = 370/528 (70%), Gaps = 29/528 (5%) Strand=Plus/Plus Query 36841 CCAGACCACTCACCTTCGGTTAAGTCCGTTGGTATCACTGGTCAGT-TGACTGGTAGTCG 36899 || |||||| || ||||| |||||||| ||| | ||||| | || |||||||||| || Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 36900 TGCTGACATCCTGATTGCCGATGACGTGGAGGTTCCGAACAACTCAGCGACTCAGGCTGC 36959 |||||||||||| ||||| |||||||| ||||| || |||||| | || ||| | || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 36960 ACGAGACCGTCTATCAGAGCTTGTGAAAGAGTTCGACGCTATCCTGAAGCCGGGAGGTAC 37019 | | || | || ||||| || || || ||||| || ||||||||||| | ||||| Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188 Query 37020 GATCATCTATCTGGGTACTCCTCAGAACGAGATGACCCTGTACCGTGAGCTGGAAGGTCG 37079 ||||||||| |||| || || |||| ||| |||||||| ||| | || || || | || Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248 Query 37080 TGGGTACACCACTACTATCTGGCCCGCTCGTTATCCACGCGA-----CAG-------GAA 37127 || ||| | || || |||||||| || || || || || || | | | Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308 Query 37128 GGACTGGCAGTCTTACGGCGA------CCGTCTGG---CTCCTATGCTTCAGGAAGAGCT 37178 ||||||| | | ||| | ||||||| | | |||| ||| | ||||| Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGC-TCA--AGGAGCT 365 Query 37179 GGAAGAGGACCCTGAGTCCTTCTACTGGCGTCCGACTGATGAAGTACGCTTCGATGATAC 37238 |||||| ||| ||| | | |||| || || || | || ||||||||| Sbjct 366 GGAAGACGAC---GAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGA 422 Query 37239 GGACCTGAAGGAACGTGAGCTGTCCTACGGTAAAGCTGGCTTCGCTCTACAGTTCATGCT 37298 |||||| || || || || || || || || | |||||||||||||||||||||||| Sbjct 423 AGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCT 482 Query 37299 TAACCCGAACCTGAGTGATGCCGAGAAGTACCCTCTTAAGCTCCGTGA 37346 ||||||||||| || || |||||||||||| | ||||| ||||| Sbjct 483 CAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123833584211484