Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031943.1
Length=40470
Score E
Sequences producing significant alignments: (Bits) Value
seq512931 226 7e-55
>seq512931
Length=538
Score = 226 bits (250), Expect = 7e-55
Identities = 369/528 (70%), Gaps = 29/528 (5%)
Strand=Plus/Plus
Query 38184 CCAGACCACTCACCTTCGGTTAAGTCAGTTGGTATCACTGGTCAGT-TGACTGGTAGTCG 38242
|| |||||| || ||||| ||||| || ||| | ||||| | || |||||||||| ||
Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68
Query 38243 TGCTGACGTCCTGATTGCCGATGACGTTGAGGTTCCGAACAACTCAGCGACTCAGGCTGC 38302
||||||| |||| ||||| |||||||||||||| || |||||| | || ||| | ||
Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128
Query 38303 ACGAGACCGTCTGTCAGAGCTTGTGAAAGAGTTCGACGCTATCCTGAAGCCGGGAGGTAC 38362
| | || | || ||||| || || || ||||| || ||||||||||| | |||||
Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188
Query 38363 AATCATCTATCTGGGTACTCCTCAGAACGAGATGACCTTGTATCGTGAGCTGGAAGGCCG 38422
|||||||| |||| || || |||| ||| |||||| | || | || || || | |||
Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248
Query 38423 TGGATACACTACTACTATCTGGCCAGCTCGTTATCCGCG---------CGACCGGAAG-- 38471
|| ||| | || || |||||||| || || || || || |||| ||
Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308
Query 38472 -GACTGGCAGTCTTACGGCGA------CCGTCTGGCAC---CGATGCTTCAGGCAGAGCT 38521
||||||| | | ||| | ||||||| | | ||||| || |||||
Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG---GAGCT 365
Query 38522 TGAAGGGGACCCTGAGGCCTTCTACTGGCGTCCGACCGATGAAGTTCGATTCGATGATAC 38581
|||| ||| ||| | | |||| || || || ||||||||||||||
Sbjct 366 GGAAGACGAC---GAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGA 422
Query 38582 TGACCTGAAGGAACGTGAGCTGTCCTATGGTAAAGCTGGCTTCGCTCTACAGTTCATGCT 38641
|||||| || || || || || ||||| || | ||||||||||||||||||||||||
Sbjct 423 AGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCT 482
Query 38642 TAACCCGAACCTGAGTGATGCCGAGAAGTACCCTCTGAAGCTCCGTGA 38689
||||||||||| || || |||||||||||| ||||||| |||||
Sbjct 483 CAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128575010319168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |