Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031943.1 Length=40470 Score E Sequences producing significant alignments: (Bits) Value seq512931 226 7e-55 >seq512931 Length=538 Score = 226 bits (250), Expect = 7e-55 Identities = 369/528 (70%), Gaps = 29/528 (5%) Strand=Plus/Plus Query 38184 CCAGACCACTCACCTTCGGTTAAGTCAGTTGGTATCACTGGTCAGT-TGACTGGTAGTCG 38242 || |||||| || ||||| ||||| || ||| | ||||| | || |||||||||| || Sbjct 10 CCTGACCACAGCCCCTCGGTGAAGTCCGTGGGTGTTACTGG-CGGTATGACTGGTAGCCG 68 Query 38243 TGCTGACGTCCTGATTGCCGATGACGTTGAGGTTCCGAACAACTCAGCGACTCAGGCTGC 38302 ||||||| |||| ||||| |||||||||||||| || |||||| | || ||| | || Sbjct 69 TGCTGACATCCTCATTGCGGATGACGTTGAGGTCCCCGGCAACTCTGGCACACAGTCCGC 128 Query 38303 ACGAGACCGTCTGTCAGAGCTTGTGAAAGAGTTCGACGCTATCCTGAAGCCGGGAGGTAC 38362 | | || | || ||||| || || || ||||| || ||||||||||| | ||||| Sbjct 129 AAGGGATCACCTTGGCGAGCTGGTAAAGGAATTCGATGCGATCCTGAAGCCTGACGGTAC 188 Query 38363 AATCATCTATCTGGGTACTCCTCAGAACGAGATGACCTTGTATCGTGAGCTGGAAGGCCG 38422 |||||||| |||| || || |||| ||| |||||| | || | || || || | ||| Sbjct 189 GATCATCTACTTGGGAACCCCACAGACCGAAATGACCCTCTACAGGGAACTTGAGGACCG 248 Query 38423 TGGATACACTACTACTATCTGGCCAGCTCGTTATCCGCG---------CGACCGGAAG-- 38471 || ||| | || || |||||||| || || || || || |||| || Sbjct 249 CGGCTACTCGACGACGATCTGGCCTGCACGATACCCTCGGGATGTGGCTGACCTTGAGTC 308 Query 38472 -GACTGGCAGTCTTACGGCGA------CCGTCTGGCAC---CGATGCTTCAGGCAGAGCT 38521 ||||||| | | ||| | ||||||| | | ||||| || ||||| Sbjct 309 CTACTGGCACGCCAAGGGCAAGCGCTCACGTCTGGACCTTACCATGCTCAAG---GAGCT 365 Query 38522 TGAAGGGGACCCTGAGGCCTTCTACTGGCGTCCGACCGATGAAGTTCGATTCGATGATAC 38581 |||| ||| ||| | | |||| || || || |||||||||||||| Sbjct 366 GGAAGACGAC---GAGAAGCTGTTCTGGAAGCCTACAGACCCTATTCGATTCGATGATGA 422 Query 38582 TGACCTGAAGGAACGTGAGCTGTCCTATGGTAAAGCTGGCTTCGCTCTACAGTTCATGCT 38641 |||||| || || || || || ||||| || | |||||||||||||||||||||||| Sbjct 423 AGACCTGCGTGAGCGCGAACTCTCATATGGCAAGGGTGGCTTCGCTCTACAGTTCATGCT 482 Query 38642 TAACCCGAACCTGAGTGATGCCGAGAAGTACCCTCTGAAGCTCCGTGA 38689 ||||||||||| || || |||||||||||| ||||||| ||||| Sbjct 483 CAACCCGAACCTTAGCGACATCGAGAAGTACCCGTTGAAGCTGCGTGA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128575010319168