Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq513204 340 2e-88 seq496362 152 5e-32 >seq513204 Length=284 Score = 340 bits (376), Expect = 2e-88 Identities = 230/261 (88%), Gaps = 14/261 (5%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||| | Sbjct 16 TCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTG 75 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 76 CCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACA----- 130 Query 8464 AAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGG 8523 | || ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 131 ---------CACCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGG 181 Query 8524 CCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGC 8583 |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| Sbjct 182 CCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGC 241 Query 8584 TGGGATTACAGGCATGAGCCA 8604 ||||||||||||||||||||| Sbjct 242 TGGGATTACAGGCATGAGCCA 262 >seq496362 Length=882 Score = 152 bits (168), Expect = 5e-32 Identities = 393/590 (67%), Gaps = 19/590 (3%) Strand=Plus/Minus Query 23511 TGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCC 23570 ||| |||||||| || | ||||| || | | ||||||||| || || ||||| ||||| Sbjct 631 TGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCC 572 Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630 |||||| || ||||||||||| | ||| || || | | ||| | || || |||||||| Sbjct 571 TGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAAT 512 Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACG-TGTACCAAATGTTGCATTATAATCAGAAA 23689 || || || || ||||| || | | || | | | ||| | || ||||| | Sbjct 511 TCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAA----GAATCTGAATCA---A 459 Query 23690 TCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTA 23749 |||||| ||| ||| | || ||| ||| | | || ||| | ||| || | Sbjct 458 TCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGA 399 Query 23750 AGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTT 23809 | | | | ||| ||| | | ||| ||| ||| || || |||| || |||| ||| Sbjct 398 ATAAATCGGCTTTCTCTGCTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTTT 339 Query 23810 CAGAATGAATATTTTCAATAGCAATCTGAAACCCATA-AAAACATCTAGCTTCAGACAAT 23868 | ||||||||||| || || || || ||||| ||| || | ||||||| || Sbjct 338 CGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATAT 279 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 || || ||||| | ||| ||| ||| | |||||| || ||||| || || ||| || Sbjct 278 TGCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGGCG 219 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGAT--AA---TTTTTTCC 23983 || || || | || | ||| ||||| | | ||| || || || || || |||| Sbjct 218 AAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTC--TTTATTCAACTTGTTATTCC 161 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC-CAAGGCA 24042 | || || | ||||| ||| ||||||| ||| || | ||||| ||||| || | | | | Sbjct 160 AGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAAACTCGCTCCATGGA 101 Query 24043 CGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 ||||| | | ||||||||| | || | || ||||| || || || Sbjct 100 --TTTATAAAATTCCCAAATATCTTGGTGCTTGATCGGAAAAATGACAAA 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518062462662800