Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq513204 340 2e-88
seq496362 152 5e-32
>seq513204
Length=284
Score = 340 bits (376), Expect = 2e-88
Identities = 230/261 (88%), Gaps = 14/261 (5%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
|||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||| |
Sbjct 16 TCTCGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTG 75
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463
|||||| ||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 76 CCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACA----- 130
Query 8464 AAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGG 8523
| || ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 131 ---------CACCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGG 181
Query 8524 CCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGC 8583
|||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct 182 CCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGC 241
Query 8584 TGGGATTACAGGCATGAGCCA 8604
|||||||||||||||||||||
Sbjct 242 TGGGATTACAGGCATGAGCCA 262
>seq496362
Length=882
Score = 152 bits (168), Expect = 5e-32
Identities = 393/590 (67%), Gaps = 19/590 (3%)
Strand=Plus/Minus
Query 23511 TGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCC 23570
||| |||||||| || | ||||| || | | ||||||||| || || ||||| |||||
Sbjct 631 TGCGAAATCACAGTGAACACCTTCGTCACGAGAAATCAATTCGTTTGAGAATGTCAATCC 572
Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630
|||||| || ||||||||||| | ||| || || | | ||| | || || ||||||||
Sbjct 571 TGGCATCAAACCTCGTTTTTTCAACCAGAAAATGGAACAAAAAGCACCTGAGAAGAAAAT 512
Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACG-TGTACCAAATGTTGCATTATAATCAGAAA 23689
|| || || || ||||| || | | || | | | ||| | || ||||| |
Sbjct 511 TCCTTCCACTGCTGCAAAAGCAATCAATCGCTCTGCGAAA----GAATCTGAATCA---A 459
Query 23690 TCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTA 23749
|||||| ||| ||| | || ||| ||| | | || ||| | ||| || |
Sbjct 458 TCCATTGAATTGCCCAGTCCGCTTTCTTTTTGATAGCAGGAAAAACTTCTAATGCGTTGA 399
Query 23750 AGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTT 23809
| | | | ||| ||| | | ||| ||| ||| || || |||| || |||| |||
Sbjct 398 ATAAATCGGCTTTCTCTGCTTCGTCTTTTACATAAGTGTCGATTAACAAGGAATACGTTT 339
Query 23810 CAGAATGAATATTTTCAATAGCAATCTGAAACCCATA-AAAACATCTAGCTTCAGACAAT 23868
| ||||||||||| || || || || ||||| ||| || | ||||||| ||
Sbjct 338 CGCTGTGAATATTTTCCATCATGATTTGGAAACCATAGAAAGAATTTCGCTTCAGCATAT 279
Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928
|| || ||||| | ||| ||| ||| | |||||| || ||||| || || ||| ||
Sbjct 278 TGCACTTCATTTACAAAGTTTTCAGCAAGATTTTCATTTACAATTCCGTCTGAAGCGGCG 219
Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGAT--AA---TTTTTTCC 23983
|| || || | || | ||| ||||| | | ||| || || || || || ||||
Sbjct 218 AAAAATGCTAAAATGTGTTTGATAAAGTATTGTTCGTC--TTTATTCAACTTGTTATTCC 161
Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC-CAAGGCA 24042
| || || | ||||| ||| ||||||| ||| || | ||||| ||||| || | | | |
Sbjct 160 AGTCGTTTAAATCTTGTGACAAATCAATTTCTTCGGCAGTCCAGAAACTCGCTCCATGGA 101
Query 24043 CGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092
||||| | | ||||||||| | || | || ||||| || || ||
Sbjct 100 --TTTATAAAATTCCCAAATATCTTGGTGCTTGATCGGAAAAATGACAAA 53
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518062462662800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |