Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq152719 150 1e-31 seq152718 134 1e-26 seq6427 131 1e-25 seq59939 105 5e-18 seq59938 105 5e-18 >seq152719 Length=2073 Score = 150 bits (166), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | | ||| || || || ||| ||| || ||||||||||| || Sbjct 40 CATACCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 99 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| ||||||||||| ||||||||||||| | ||||||||| | Sbjct 100 GGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGG 159 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| ||||| |||| | ||| | ||||||||| || || Sbjct 160 AGGGATGCCCTCCTTATCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCGCTGGGTT 218 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| || || | ||| || || ||||||||||| ||||| ||||| Sbjct 219 CAACCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270 Score = 150 bits (166), Expect = 1e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | ||| ||||| |||| | ||| || ||||||||||| || Sbjct 268 CATACCTCCTCTCAGCCGCAAGACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTC 327 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| |||| ||||||||||| ||||||||||| | | |||||| |||| Sbjct 328 GGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGG 387 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | |||||||| ||| ||||| |||| | ||| | ||||||||| || || Sbjct 388 AGGGATGCCTTCCTTATCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCGTTGGGTT 446 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| ||| || || ||||| || |||||||||||||| ||||| || || Sbjct 447 CAACCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAAT 498 Score = 125 bits (138), Expect = 5e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| | || ||| || || | ||| || || |||||||| ||||| Sbjct 497 ATACCTCCTCTCAAGCGCAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCT 556 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | | ||| | || ||||||||||| ||||||||||||| | ||||||||| | | Sbjct 557 GACATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGA 616 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| |||| | ||| | ||||||||| || ||| Sbjct 617 GGGATGCCCTCCTTATCCTGGATCTT-AGCTTTTACATTCTCAATGGTGTCGCTGGGTTC 675 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || ||||| || || ||||||||||| ||||| ||||| Sbjct 676 AACCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 726 >seq152718 Length=3078 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || | |||||| | ||| || || || || ||| ||| || |||||| |||| ||| Sbjct 2144 ATACCTCTTCTCAGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCG 2203 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | ||| ||| | || ||||||||||| ||||||||||||| | | ||| || ||| Sbjct 2204 GAGAGAGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAA 2263 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||| | ||| | ||||||||| || ||| Sbjct 2264 GGGATGCCTTCCTTATCCTGAATCTT-AACTTTGACATTCTCAATGGTGTCGCTGGGTTC 2322 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || ||||| || || ||||||||||| ||||| ||||| Sbjct 2323 AACCTCCAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2373 Score = 120 bits (132), Expect = 2e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | ||| ||||| || || || ||| || |||||| |||| || Sbjct 2371 CATACCTCCTCTCAGCCGCAAGACCAGATGGAGGGTAGACTCTTTCTGGATGCTGTATTC 2430 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| ||| |||||| |||| ||| ||||| | | | |||||| |||| Sbjct 2431 GGAGAGAGTGCGGCTGTCTTCCAGCAGCTTGCCGCCAAAGTTGAGCCTCTGCTGGTCTGT 2490 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| || ||||| || || | | |||||||| || ||| Sbjct 2491 AGGGAATCCTTCCTTATCTTGGATCTTGGCTTTGAAATTATCAATGGTGTCACTGGGTTC 2550 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | || ||||| || |||||||||||||| ||||| || || Sbjct 2551 AACCTCCAGAGCTATAGTCTTCCCTGTGAGGGTCTTCACAAAGATCTGAAT 2601 >seq6427 Length=3314 Score = 131 bits (144), Expect = 1e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||||||| | | || || || || ||| |||||| ||||||||||| |||| | Sbjct 3108 CCGCCTCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3167 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| ||||||||||||| | ||||||||||| || Sbjct 3168 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 3227 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| ||||| ||| | || | ||||||||| || || ||| Sbjct 3228 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCGCTGGGCTCAACC 3287 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGG 44317 |||| || || ||||| ||||||||| Sbjct 3288 TCCAGGGTGATGGTCTTGCCCGTGAGG 3314 >seq59939 Length=800 Score = 105 bits (116), Expect = 5e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || ||||||||||| ||||||||||||| | ||||||||||| || | |||||||| Sbjct 11 TCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 70 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| ||||| ||| | || | || ||||| | || ||||| | || || Sbjct 71 TCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTGATG 130 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||||||||||||| ||||| |||||| Sbjct 131 GTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 166 >seq59938 Length=2926 Score = 105 bits (116), Expect = 5e-18 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| || ||||| | || ||| |||||| ||||||||||| | | Sbjct 2712 CCACCCCTCAGATGCAGGACCAGACGGAGGGTGGACTCCTTCTGGATGTTGTATAGAGAG 2771 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||| ||||| ||||||||||||| | ||||||||||| || Sbjct 2772 GGT--GCGGCCATCTTCCGAATGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 2829 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| ||||| ||| | || | ||||||||| || || ||| Sbjct 2830 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCAACC 2889 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 |||| || || ||||| || ||||||||||| |||| Sbjct 2890 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 2926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357684821458734