Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq152719 150 1e-31
seq152718 134 1e-26
seq6427 131 1e-25
seq59939 105 5e-18
seq59938 105 5e-18
>seq152719
Length=2073
Score = 150 bits (166), Expect = 1e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | | ||| || || || ||| ||| || ||||||||||| ||
Sbjct 40 CATACCTCCTCTCAGGCGGAGCACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 99
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| |||| ||||||||||| ||||||||||||| | ||||||||| |
Sbjct 100 GGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGG 159
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | || ||||| ||| ||||| |||| | ||| | ||||||||| || ||
Sbjct 160 AGGGATGCCCTCCTTATCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCGCTGGGTT 218
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||||| || || | ||| || || ||||||||||| ||||| |||||
Sbjct 219 CAACCTCCAGAGTGATGGACTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 270
Score = 150 bits (166), Expect = 1e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | ||| ||||| |||| | ||| || ||||||||||| ||
Sbjct 268 CATACCTCCTCTCAGCCGCAAGACCAGATGAATGCAGGACTCTTTCTGGATGTTGTAGTC 327
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| |||| ||||||||||| ||||||||||| | | |||||| ||||
Sbjct 328 GGAGAGAGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCTGG 387
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | |||||||| ||| ||||| |||| | ||| | ||||||||| || ||
Sbjct 388 AGGGATGCCTTCCTTATCCTGGATCTT-AGCTTTGACATTCTCAATGGTGTCGTTGGGTT 446
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| ||| || || ||||| || |||||||||||||| ||||| || ||
Sbjct 447 CAACCACCAGAGTGATAGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGAAT 498
Score = 125 bits (138), Expect = 5e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| | || ||| || || | ||| || || |||||||| |||||
Sbjct 497 ATACCTCCTCTCAAGCGCAGCACAAGATGGATGGTGGATTCTTTCTGGATGTTATAATCT 556
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| | ||| | || ||||||||||| ||||||||||||| | ||||||||| | |
Sbjct 557 GACATGGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCAGGA 616
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| |||| | ||| | ||||||||| || |||
Sbjct 617 GGGATGCCCTCCTTATCCTGGATCTT-AGCTTTTACATTCTCAATGGTGTCGCTGGGTTC 675
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || ||||| || || ||||||||||| ||||| |||||
Sbjct 676 AACCTCCAGAGTGATAGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 726
>seq152718
Length=3078
Score = 134 bits (148), Expect = 1e-26
Identities = 170/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || | |||||| | ||| || || || || ||| ||| || |||||| |||| |||
Sbjct 2144 ATACCTCTTCTCAGCCGCAAGACAAGATGGAGGGTGGACTCTTTCTGGATGCTGTAGTCG 2203
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| ||| ||| | || ||||||||||| ||||||||||||| | | ||| || |||
Sbjct 2204 GAGAGAGTGCGACCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTGTACTGTTCAGAA 2263
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||| | ||| | ||||||||| || |||
Sbjct 2264 GGGATGCCTTCCTTATCCTGAATCTT-AACTTTGACATTCTCAATGGTGTCGCTGGGTTC 2322
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| || || ||||| || || ||||||||||| ||||| |||||
Sbjct 2323 AACCTCCAGAGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 2373
Score = 120 bits (132), Expect = 2e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | ||| ||||| || || || ||| || |||||| |||| ||
Sbjct 2371 CATACCTCCTCTCAGCCGCAAGACCAGATGGAGGGTAGACTCTTTCTGGATGCTGTATTC 2430
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| ||| |||||| |||| ||| ||||| | | | |||||| ||||
Sbjct 2431 GGAGAGAGTGCGGCTGTCTTCCAGCAGCTTGCCGCCAAAGTTGAGCCTCTGCTGGTCTGT 2490
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | |||||||| || ||||| || || | | |||||||| || |||
Sbjct 2491 AGGGAATCCTTCCTTATCTTGGATCTTGGCTTTGAAATTATCAATGGTGTCACTGGGTTC 2550
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| | || ||||| || |||||||||||||| ||||| || ||
Sbjct 2551 AACCTCCAGAGCTATAGTCTTCCCTGTGAGGGTCTTCACAAAGATCTGAAT 2601
>seq6427
Length=3314
Score = 131 bits (144), Expect = 1e-25
Identities = 153/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||||||| | | || || || || ||| |||||| ||||||||||| |||| |
Sbjct 3108 CCGCCTCTCAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 3167
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| ||||||||||||| | ||||||||||| ||
Sbjct 3168 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 3227
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| ||||| ||| | || | ||||||||| || || |||
Sbjct 3228 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCGCTGGGCTCAACC 3287
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGG 44317
|||| || || ||||| |||||||||
Sbjct 3288 TCCAGGGTGATGGTCTTGCCCGTGAGG 3314
>seq59939
Length=800
Score = 105 bits (116), Expect = 5e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242
|| ||||||||||| ||||||||||||| | ||||||||||| || | ||||||||
Sbjct 11 TCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTG 70
Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
||| ||||| ||| | || | || ||||| | || ||||| | || ||
Sbjct 71 TCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCACTAGGCTCAACCTCGAGGGTGATG 130
Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| ||||||||||||||||| ||||| ||||||
Sbjct 131 GTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 166
>seq59938
Length=2926
Score = 105 bits (116), Expect = 5e-18
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| || ||||| | || ||| |||||| ||||||||||| | |
Sbjct 2712 CCACCCCTCAGATGCAGGACCAGACGGAGGGTGGACTCCTTCTGGATGTTGTATAGAGAG 2771
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||| ||||| ||||||||||||| | ||||||||||| ||
Sbjct 2772 GGT--GCGGCCATCTTCCGAATGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 2829
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| ||||| ||| | || | ||||||||| || || |||
Sbjct 2830 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTCAACC 2889
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
|||| || || ||||| || ||||||||||| ||||
Sbjct 2890 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 2926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357684821458734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |