Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq87 109 4e-19 >seq87 Length=2632686 Score = 109 bits (120), Expect = 4e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818 || ||||||||| | || | ||| |||||||| || ||||| || ||||| ||||| ||| Sbjct 460977 TGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGCACCCCTAATCCC 460918 Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGA 101878 |||||||| || | || ||||| ||||| || |||| || || || || || || || Sbjct 460917 ATATCAGCAGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCACACGTAGAACTGG 460858 Query 101879 CTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 | | | | || || || |||| | |||| |||||| ||||| |||| Sbjct 460857 CAGAGTGCGTGGCAGGGGGGCAGCGCCATCCTAGGAAGGTCTGCAACA 460810 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 102038 TATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT 102097 || ||||| || || ||||||||||| || |||||||||||||| || || || || ||| Sbjct 460166 TACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTCACCCTCTTCT 460107 Query 102098 CTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGC 102157 |||||| || ||||| || || | || | ||| || || |||||||| || | | Sbjct 460106 CTGTCAGTGAACCCAAGGTTGTCCAGGAAGTTCCGAGACCCGTTGGCATCCCAGATCTTC 460047 Query 102158 ACGCCAGCTGCTGATAGCTCTTTG 102181 || || | |||| ||||| ||| Sbjct 460046 ACTCCTTTTTCTGACAGCTCCTTG 460023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361219341708236