Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq110 131 2e-25 >seq110 Length=2246181 Score = 131 bits (144), Expect = 2e-25 Identities = 185/256 (72%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| ||||||||| | |||||| || |||| || |||| Sbjct 680856 GAACTTCTCGAAGTTCCAGGACACGTCGTTCCTGCACACCGGGCTCCAGATGATCAGCTT 680915 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGT--AGG 83260 ||||||| ||| || | | ||||||||| || | || || | | || | ||| Sbjct 680916 GGGGTCGGTCATCAGAGACGTTGCGTCGTCGCTGGGTGTTGGAAG--CTTGTCCTTCAGG 680973 Query 83261 AAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAA 83318 || || || || | || || |||| | |||| || || |||||| |||||| || Sbjct 680974 AACGCAAACAGGAGGTGGGCGTCCTTCC--CGTTCACGTCCATCTTCTCAAAGAGCTGAA 681031 Query 83319 AGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCAT 83378 | || ||||||||||| || ||||||||||| | |||||| || | | |||||| ||| Sbjct 681032 ACTTGGGCTCGAAGCCATTTCCAGGACGGACATACTTCAGCGACAGGAGGATCTCTTCAT 681091 Query 83379 TCTGGGCGTTTTCCTG 83394 ||| | ||| ||||| Sbjct 681092 TCTTGCAGTTCTCCTG 681107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608741734329440