Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq249 89.7 4e-13 >seq249 Length=855460 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 20989 TTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAA 21048 || || |||| ||||| | ||||| ||| | || |||||||| ||||| ||| | || | Sbjct 398384 TTGGAGTGTTGTAGTCAGAGAGGGTGTGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCA 398325 Query 21049 GTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGA 21108 | ||||||||||| ||| | ||||||||| || ||| || |||| | | | Sbjct 398324 GCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATTTTGGCCTTCAAGTTCTCAA 398265 Query 21109 CAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATA 21168 || |||| |||||| |||| || |||||||| || || | || |||||||| | Sbjct 398264 TGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGA 398205 Query 21169 TTTGCAT 21175 | ||||| Sbjct 398204 TCTGCAT 398198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422221961488976