Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq117 455 3e-123 seq64 120 3e-22 >seq117 Length=2128962 Score = 455 bits (504), Expect = 3e-123 Identities = 1063/1595 (67%), Gaps = 41/1595 (3%) Strand=Plus/Plus Query 22409 TCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAAC 22468 || ||||||| || | | |||| ||||||| ||| || |||| || | |||||| Sbjct 876806 TCATTCCACAGGCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAAC 876865 Query 22469 TCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTG 22528 || || || | || ||||| ||| |||||| |||| | | |||| || || ||| Sbjct 876866 TCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTG 876925 Query 22529 TTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTC 22588 || ||||| ||||| ||||| || || || ||||| || | || ||| || ||| ||| Sbjct 876926 TTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTC 876985 Query 22589 AAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTC 22648 | ||| || || | || || ||| |||| | |||||||||||| || | |||||| Sbjct 876986 ACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTC 877045 Query 22649 ACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTT 22708 || |||||||| ||||| || | | ||| |||| |||| |||||| ||||| Sbjct 877046 ---TTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGAGCCTTCATACGTC 877102 Query 22709 TCGTACGGACCATATATC-GCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATAT 22767 || || || | | || ||||| | ||||||||||| ||||| ||| | ||||| || Sbjct 877103 TCATA-GGTGCCGAGCTCGGCGGCCAACTCGCAGCTCGCTTCCAAAGCGGCATAATACAT 877161 Query 22768 AGTCTCGAAGATTT---TCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACG 22824 |||||| ||||| | | ||| || || || ||| |||||| | || ||| Sbjct 877162 AGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGG---GGCTTTCAAAGGGATAACG 877218 Query 22825 CATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAG 22884 ||| | | ||| || || |||| ||||| || || || || ||||| | || || Sbjct 877219 CATAAGGATGAAGGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGCCTGTGCCGCAT 877278 Query 22885 ATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTT 22944 |||||| | || || || || || | || ||||| |||||||||| Sbjct 877279 GTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTT 877338 Query 22945 TCTGGTCACAAT---TTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT-- 22999 ||| ||||| ||| || | | |||||| ||| | ||| | Sbjct 877339 CCTG---ACAATTACTTTGGTCACGGATGCCAATTTTTTAAAGTCATAA--GTCCGCTCA 877393 Query 23000 TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 | || || |||||| |||| ||||| |||||||| || ||||||||||| ||| Sbjct 877394 GGGGTGACGTACATGTTGAGAGCGACAGAGGCCAGATTGCAAACCGCCACCTCGTCCTTG 877453 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 |||||||| || ||||| || || || ||||| ||||| || ||||||| ||| | Sbjct 877454 CTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGC 877513 Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 |||||||| || | ||||| | ||| ||||||| |||||||||||| || || || | Sbjct 877514 TGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTC 877573 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGT---GAACACGTCGCACGTACCTG 23236 |||||||||||||| || ||| | |||||| | ||||| ||| ||| Sbjct 877574 TGCGACTCGATGATTGCATACCAAAGCTGCTGAGCCTTCACCACACGCTTCAC---CCTC 877630 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296 || || | ||| || | ||| | | ||||| || | || | || || |||| Sbjct 877631 CCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGC 877690 Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356 ||||| | | ||||||||| || ||| | || || || || || |||| Sbjct 877691 CCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCGTTGTTCTCCACCCGCTTCATG 877750 Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || || || || ||||| || ||||||||||| || | ||| ||| |||||| || || Sbjct 877751 AAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCC 877810 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 |||||||| |||| |||| ||||| ||||| || ||||| ||||| ||||| | | Sbjct 877811 GTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATG 877870 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || ||||| ||||| || || || |||||||| || ||||| || ||||||||||| Sbjct 877871 GCGAAGGCGCCAGGTCTTTTGTTCCCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAA 877930 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA---CACTCGAA 23593 || || | ||| || ||||| |||||||| |||| ||| || | ||| Sbjct 877931 ACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTGCCGGCGATGTAGCTC--- 877987 Query 23594 CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653 || | | || || | | || | || || ||||| | ||||| || || | Sbjct 877988 CCCGTGGATCTAATGCAGCTGACTGCCACGCCAATCCCTCCAGCTGATTTGGAGATGAGG 878047 Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713 ||||| || ||||| ||||||||||| |||||||||||||| || || | |||| || | Sbjct 878048 GCGCAATGCTTCAGCGTGTCGTAGATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGG 878107 Query 23714 AAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGC 23773 || || |||| |||| || || | || ||| || |||||| |||||| Sbjct 878108 AAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGG 878167 Query 23774 GTAAAGTATCCA-TTC---GACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTC 23829 || || ||| ||| |||| || ||||| || |||||| | || || || ||| Sbjct 878168 GTGAA----CCACTTCTCTGACAGCAGGTTGTAGGTCTCGATGACTGCTTCGATATCCGT 878223 Query 23830 TCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCC 23889 ||||| || || | || || | ||| | ||||| || || | ||| | ||| Sbjct 878224 CCCGTGGATTCCCACAGCCACCCTCATGAGCATGTGCTGCGGACGCTCAGCTACTTTGCC 878283 Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949 || || || | ||| || || || | || || || || ||||| ||| ||| || Sbjct 878284 ATTGATCTTTAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAA 878343 Query 23950 GTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984 || | || | | ||||||||| || | |||| Sbjct 878344 ATCTCTGTCATAGATTATGGCCGAGTTAAGGCGGT 878378 >seq64 Length=3290765 Score = 120 bits (132), Expect = 3e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 |||| || || |||||||||| || || ||||| | ||| | ||||| || || || | Sbjct 2550259 TTTCCACTCGCTTCATAAAAAGGTCTGGGATCCACAAGGCGAAAAACAGGTCCCGCGCCC 2550200 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | ||| ||||| || |||||||| ||||| |||||||| || ||||| || | ||||| Sbjct 2550199 TCTGCTCTTCTTTACCCGTGTTCTTCTTCAACTCCAAAAACTCGAACACATCAGAATGCC 2550140 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495 ||||||||||||| | || ||||| || || |||| Sbjct 2550139 ACGGCTCGAGGTACATAGCGAACGCCCCAGGCCTCT 2550104 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 |||||| |||||| |||||||||||| || || || || |||||||| | || || || Sbjct 2550759 CACCTCATCTTTGCTCGTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGT 2550700 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || ||| || || |||| ||||| | ||||||||| | |||||| || || Sbjct 2550699 GCCCAGGTTTTGCTGATTACTCTTTCTGTTGCAGGCATCCTTGTAAACCATGTATGGTGT 2550640 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 || || || ||||||||| ||||| || ||||| Sbjct 2550639 ACCAGTTTCTGTCTGCGACTCAATGATGGCGTACCACA 2550602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445726080429120