Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq132 150 1e-31 >seq132 Length=1846253 Score = 150 bits (166), Expect = 1e-31 Identities = 213/294 (72%), Gaps = 8/294 (3%) Strand=Plus/Plus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 ||||||| ||||||| || ||||||| ||||| | | ||| || || | | ||| Sbjct 797607 CCTGCAAGGAGGACTGCAGAATCATCACAGACACAG-CGTCCAAGCTCGAGCGCTGCGGC 797665 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 |||||||||||||| |||| || ||||| || || || ||||| || || | | || Sbjct 797666 TTCTACTGGGGTCCCCTGGGAGTGGAGGACGCTCACCGCATGCTTCGGGACGCCCCGCTC 797725 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCAC 91993 |||||||| ||||| || |||||| | || || |||||||| ||||||||||| || ||| Sbjct 797726 GGCAGCTTCCTCATCCGTGATAGCCGTCAGAAAGACGTCTTCTTCACGCTGTCCTACCAC 797785 Query 91994 TCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTTGGCT 92053 | ||| ||||| ||||| ||| | ||||| |||||| | || | || || | || Sbjct 797786 GCCAAGACGGGACCGGTCAGCGTGCGCATTGACTACAAGCGCCAGAAGTTCTCACTAGC- 797844 Query 92054 GGGAGCAAACAGAGGT-TTTC--ATCGGTCCTTCTCCTGTTGGACCATTACATC 92104 | |||| | | ||| |||| | | || || ||| ||||| ||||||||| Sbjct 797845 --GGGCAACCTGCGGTCTTTCCAAACACTCTTTGCCCTCTTGGAGCATTACATC 797896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356202184204108