Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq117 145 1e-29 >seq117 Length=2128962 Score = 145 bits (160), Expect = 1e-29 Identities = 330/492 (67%), Gaps = 12/492 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || ||| | || ||||| | ||| | ||| |||| || |||||| || Sbjct 877902 CAGGGGGGGAACAAAAGACCTGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACTTCGAT 877843 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||||||| | ||| || || ||| | || || ||| |||||||||||| Sbjct 877842 GTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGCCAGGGAC 877783 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 |||| || || || ||| | || || | ||||||||||| || ||| ||| | Sbjct 877782 CTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAACGAAG-- 877725 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 ||||| ||| ||||| || | | | ||||| ||| || |||||||| || ||| Sbjct 877724 -ACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGAGGAG 877666 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCG---AT 97169 ||||| | ||||| || ||| | ||||| || |||| || || | | Sbjct 877665 TTTGAAGAACTCTACACCAGATATGAGAAGGAGGG--GA-GGGTGAAGCGTGTGGTGAAG 877609 Query 97170 GCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 || | | || ||| | || ||| | | | ||| ||| || || || |||||||| Sbjct 877608 GCTCAGCAGCTTTGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTACATG 877549 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 ||||||| ||| || || | || |||||||| | | |||||||||||||| || Sbjct 877548 GTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGTGC 877489 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349 ||| || ||||||||||| || |||||| | ||||||| ||| |||||| | Sbjct 877488 AGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTTGCAAT 877429 Query 97350 CTGGCATCGGTC 97361 ||||| || ||| Sbjct 877428 CTGGCCTCTGTC 877417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740992171195360