Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq87 123 2e-23 >seq87 Length=2632686 Score = 123 bits (136), Expect = 2e-23 Identities = 133/175 (76%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| ||||||||||| || || | |||||||||||| || ||||| ||||||||||| Sbjct 460176 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTC 460117 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || ||||| |||| || || || |||| |||| | || || ||||| || Sbjct 460116 ACCCTCTTCTCTGTCAGTGAACCCAAGGTTGTCCAGGAAGTTCCGAGACCCGTTGGCATC 460057 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946 ||||||||| || || || || || ||||| ||||| ||||| || |||| |||| Sbjct 460056 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 460002 Score = 102 bits (112), Expect = 6e-17 Identities = 117/156 (75%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 25497 GTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCG 25556 |||| || || |||||||| || || || | |||||||||||||| || || ||||| Sbjct 460983 GTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGCACCCCT 460924 Query 25557 AACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTA 25616 || ||||| || | || | |||||| ||||||||||| ||||| |||||| |||||| Sbjct 460923 AATCCCATATCAGCA-GAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCACACGTA 460865 Query 25617 AAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 ||||| || | | || ||| || || || || || Sbjct 460864 GAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 460829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340107603690228