Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq117 176 1e-38 seq64 84.2 6e-11 >seq117 Length=2128962 Score = 176 bits (194), Expect = 1e-38 Identities = 554/844 (66%), Gaps = 22/844 (3%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 |||||||| | | | ||| || |||||||| ||| | ||| | || ||| | || ||| Sbjct 878289 ATCAATGGCAAAGTAGCTGAGCGTCCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATC 878230 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTA--AGTGCTCGTGTAT 363547 || | ||||| | || || | || || || || || || || || | ||| | Sbjct 878229 CACGGGACGGATATCGAAGCAGTCATCGAGACCTACAACCTGCTGTCAGAGAA-GTGG-T 878172 Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 |||| |||||| | || || | | |||||||||||| | || ||| |||| | Sbjct 878171 TCACCCACGCCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCT 878112 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 |||| || || |||||||| || ||||||||| |||| ||||| || ||| ||| Sbjct 878111 GCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGGATCTACGACACGCTGAAGCATT 878052 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCA 363726 | || || || ||||| || || || ||||| || | || | || | | || Sbjct 878051 GCGCCCTCATCTCCAAATCAGCTGGAGGGATTGGCGTGGCAGTCAGCTGCATTAGATCCA 877992 Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 | | || ||||| |||||| || | || || ||||| || || ||| | | Sbjct 877991 CGGGG-AGCTACATCGCCGGCACCAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGG 877933 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGT 363844 || | |||| || ||| | || || || ||||| || | |||| | || || | Sbjct 877932 GTTTACAACAACACAGCGCGTTATGTTGATCAGGGGGGGAACAAAAGACCT--GGCGCCT 877875 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || ||||| || ||||| || |||| | ||||| || || ||||| ||| | Sbjct 877874 TCGCCATGTACCTGGAGCCCTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGA 877815 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 |||||||||| ||||| ||| || | || |||||||| || || ||| | |||||| Sbjct 877814 ACACGGGAAAGGAGGAGCAGCGAGCCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACC 877755 Query 363965 ATTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGT 364023 || |||||||| |||||| || ||| | ||||| || | || || ||| || Sbjct 877754 TCTTCATGAAGCGGGTGGAGAACAACGAAG-ACTGGTCCCTGATGTGTCCGGCCGACTGC 877696 Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTG--CTCTATACGAAAAGTATGAAT 364081 || || || || ||||| || || | || | ||||| || | | ||||| Sbjct 877695 CCCGGGCTGGATGAGTGCTGGGGGGAGGAGTTTGAAGAACTCTACACCAGA--TATGAGA 877638 Query 364082 CGGAGGGAAAGG---CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138 |||||| | || ||| | | || ||| |||| |||| ||| ||||| | Sbjct 877637 AGGAGGGGAGGGTGAAGCGTGTG---GTGAAGGCTCAGCAGCTTTGGTATGCAATCATCG 877581 Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198 | ||||||| || || || || || || ||| | ||||||||| | |||||| | ||| Sbjct 877580 AGTCGCAGACAGAAACCGGGACGCCGTACATGGTCTACAAAGATGCCTGCAACAGGAAGA 877521 Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258 |||||||||| | || || || || || |||||||| || || || || | || | Sbjct 877520 GCAACCAGCAGAATCTGGGCACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTCGAGT 877461 Query 364259 ACAC 364262 |||| Sbjct 877460 ACAC 877457 >seq64 Length=3290765 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 |||||||| |||||||| |||||||| ||| | ||| | || |||||| | ||| | Sbjct 2550112 GGGGCGTTCGCTATGTACCTCGAGCCGTGGCATTCTGATGTGTTCGAGTTTTTGGAGTTG 2550171 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| |||||||| ||||| || | | || || || ||||| | || | ||| | Sbjct 2550172 AAGAAGAACACGGGTAAAGAAGAGCAGAGGGCGCGGGACCTGTTTTTCGCCTTGTGGATC 2550231 Query 363958 TCTGACCATTTTATGAAGCGCGTGGA 363983 | |||| |||||||||||| ||||| Sbjct 2550232 CCAGACCTTTTTATGAAGCGAGTGGA 2550257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303232764458552