Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq117 196 5e-45 seq64 118 1e-21 >seq117 Length=2128962 Score = 196 bits (216), Expect = 5e-45 Identities = 960/1509 (64%), Gaps = 44/1509 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||| ||||||||| || | | ||| || || || | ||| ||| ||| Sbjct 876851 TTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCC 876910 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || | |||||||| ||||||||||| || ||||| | || |||||||| | || | Sbjct 876911 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAGC 876970 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || | || ||| || || ||| | ||||| ||| ||| ||||| Sbjct 876971 AGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCAC 877030 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || ||| || ||||||||||||||||| | |||||||| || | || | Sbjct 877031 AGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGAG 877090 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | | || |||| || | | || | |||||| ||||| |||| || Sbjct 877091 CCTTCATACGTCTCATAGGTGCCG--AGCTCGGCGGCCAACTCGCAGCTCGCTTCCAAAG 877148 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 || | |||| || ||||| || || |||||||||| || || ||| || Sbjct 877149 CGGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCAA 877208 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | || |||| || | || ||||| || | ||||| | || | || || |||| Sbjct 877209 AGGGATAACGCATAAGGATGAAGGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGCC 877268 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTT 145535 || |||||| | |||| || || | || || || |||||||| | Sbjct 877269 TGTGCCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCT 877328 Query 145536 TATTCAAGTTTCGCACTACTACCTTTGTAATG--TGCCGCAACTTTTCAAAGTCAAACCG 145593 | |||||||| | || | ||| || || | | |||| || |||| ||||||| | Sbjct 877329 TGTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCC--AATTTTTTAAAGTCATA--- 877383 Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653 || | ||| | || | | |||| |||| || |||| ||| ||||| ||| Sbjct 877384 AGTCCGCTCAGGGGTGACGTACATGTTGAGAGCGACAGAGGCCAGATTGCAAACCGCCA- 877442 Query 145654 CTCCTCGGCGTCGCT---GTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGT 145710 ||||| | | ||| ||| | ||||| || | ||| | ||||| || |||||||| Sbjct 877443 --CCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGT 877500 Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCC 145770 |||||||| ||||| || || ||||||||||| || || ||||||| ||||||||| Sbjct 877501 GCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCGT 877560 Query 145771 GCCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGCACGCACCTG 145827 || || || ||||| ||| | ||| | | | || | ||| || |||| Sbjct 877561 CCCGGTTTCTGTCTGCGACTCGATGATTGCATACCAAAGC---TGCTGAGCCTTCACCAC 877617 Query 145828 CTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887 ||| | ||||| | || ||| | ||||||| || |||||| | || | Sbjct 877618 ACGCTTCACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCCCA 877677 Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947 ||| || ||| ||||| || | | ||||||||||| ||||| | ||||| | Sbjct 877678 GCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCGTTGTTCTC 877737 Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCTTTG 146005 || |||| ||| || | || || | |||||| ||||| | || ||| | || | || Sbjct 877738 CACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCTGGCTCGCTG 877797 Query 146006 CAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCAC 146065 | ||||| ||| |||| ||||| | || | | | | || |||||| Sbjct 877798 C--TCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCAG 877855 Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGT 146122 || || | || | ||||| ||| || || |||| || ||||| || || | ||| Sbjct 877856 GGCTCCAGGTACATGGCGAAGGCGCCAGGTCTTTTGTTCCCCCCCTGATCAACATAACGC 877915 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAG 146182 | ||||||| | || | || ||| || ||| ||| ||| |||||| || | Sbjct 877916 GCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTGCCG 877975 Query 146183 TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTAC 146242 || | | || ||| | | ||| || |||||| | || || | | Sbjct 877976 GCGATGTAGCTCCCCGTGGATCTAATGCAGCTGACTGCCACGCCAATCCCTCCAGCTGAT 878035 Query 146243 TTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTC 146300 ||||| || |||||| | ||||| |||||||| || || ||||| || |||| Sbjct 878036 TTGGAGATGAGGGCGCAATGCTTCAGCGTGTCGTAGATCCCCTCGATGCTGTCATCCTTC 878095 Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACG 146360 ||| ||||||| ||||| | ||| ||||| | | || || || ||| | | Sbjct 878096 --ATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCATTGAAGAGGG 878153 Query 146361 TCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCT 146419 ||||| ||||| || || || || || | || || || || ||||| | || Sbjct 878154 TCGGGGAGGCGTGGGTGAACCACTTCTCTG-ACAGCAGGTTGTAGGTCTCGATGACTGCT 878212 Query 146420 TGAATGT-CGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTC 146478 | || | |||| || || || |||| ||| || | |||||||||||| || || ||||| Sbjct 878213 TCGATATCCGTC-CCGTGGATTCCCACAGCCACCCTCATGAGCATGTGCTGCGGACGCTC 878271 Query 146479 CGCCACTT---GATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGAA 146535 || |||| |||| ||||||| || ||| | |||||| || ||| | || || Sbjct 878272 AGCTACTTTGCCATTG---ATCTTTAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCAAA 878328 Query 146536 AAATTTGTA 146544 || ||||| Sbjct 878329 GAAGTTGTA 878337 >seq64 Length=3290765 Score = 118 bits (130), Expect = 1e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | ||||||||| | ||||| |||||| |||||||||| ||||| |||||||||| Sbjct 2550742 TGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTTTGCTGAT 2550683 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 |||| || |||||||| || |||||||| | |||||| ||| ||||| || ||||| Sbjct 2550682 TACTCTTTCTGTTGCAGGCATCCTTGTAAACCATGTATGGTGTACCAGTTTCTGTCTGCG 2550623 Query 145788 TCTCCACGAT 145797 ||| | ||| Sbjct 2550622 ACTCAATGAT 2550613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471970106442240