Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq117 116 3e-21 seq80 87.8 2e-12 >seq117 Length=2128962 Score = 116 bits (128), Expect = 3e-21 Identities = 191/271 (70%), Gaps = 7/271 (3%) Strand=Plus/Plus Query 129580 GGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTAT 129639 || |||||||||||||| |||| ||||| || ||| |||| | | ||| || ||| || Sbjct 877304 GGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGAT 877363 Query 129640 TTTAACATTTCAAAATTGTAC-TCGCCTACATCGATGTCG-ACAAATTGATTGACACAAA 129697 || ||| ||| | || || || || | || || ||| |||| | ||| Sbjct 877364 GCCAATTTTTTAAAGTCATAAGTCCGCT-CAGGGGTGACGTACATGTTGAGAGCGACA-- 877420 Query 129698 TCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGC 129757 ||||||| |||||| || || |||| ||| | |||||||||| ||||| | || Sbjct 877421 --GAGGCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGC 877478 Query 129758 ACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCAT 129817 | | || || || |||||||||| || || || || || ||| ||||||| |||| Sbjct 877479 AGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCAT 877538 Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTC 129848 ||||||| | |||||||||||| || ||||| Sbjct 877539 CTTTGTAGACCATGTACGGCGTCCCGGTTTC 877569 >seq80 Length=2822622 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| ||||| |||| ||||| || ||||||| || || || | Sbjct 742405 AAACATGCAGATCTTTGTGAAAACCCTAACTGGTAAGACCATCACTCTCGAGGTTGAGCC 742346 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || |||| ||||| || || |||||||| ||||| || || Sbjct 742345 CAGTGACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCTGA 742286 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || || | || || ||||||||||| ||| Sbjct 742285 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAG 742255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419690984712340