Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq249 89.7 5e-13 seq80 89.7 5e-13 >seq249 Length=855460 Score = 89.7 bits (98), Expect = 5e-13 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 64257 TTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGA 64316 || || ||||||| || | || |||| | | ||||| ||||||||||| ||| | || | Sbjct 398384 TTGGAGTGTTGTAGTCAGAGAGGGTGTGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCA 398325 Query 64317 GCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCA 64376 ||| ||||||||| || || || ||||| || || || ||||| ||| | ||| | Sbjct 398324 GCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATTTTGGCCTTCAAGTTCTCAA 398265 Query 64377 CTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAA 64436 || |||| || || || || | ||| | |||||| || || | || || || || | Sbjct 398264 TGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGA 398205 Query 64437 TTTGCAT 64443 | ||||| Sbjct 398204 TCTGCAT 398198 >seq80 Length=2822622 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||||||||||||| | || |||| ||||||||| || ||||| || || || || || Sbjct 742253 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGG 742312 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| ||| ||| ||| | || |||| || || || || | ||| | |||||| Sbjct 742313 ATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTA 742372 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || | ||||| || || || ||||| || Sbjct 742373 CCAGTTAGGGTTTTCACAAAGATCTGCATGTT 742404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499599607127840