Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq117 194 2e-44 >seq117 Length=2128962 Score = 194 bits (214), Expect = 2e-44 Identities = 1015/1601 (63%), Gaps = 37/1601 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||||| |||||| ||||||||| || ||||| || ||||| |||||| Sbjct 878337 TACAACTTCTTTGGCTTCAAGACTCTGGAGCGCTCCTACCTGCTAAAGATCAATGGCAAA 878278 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| ||||| || |||| ||| | || || | || || ||||| || Sbjct 878277 GTAGCTGAGCGTCCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGAT 878218 Query 93838 ATGCCGAAT--GTTTTGCGGGCTTTCAGAGACATGCGG---GACAAGAGGTATACCATGG 93892 || |||| || | | | | || || ||| | || ||| ||| ||| | Sbjct 878217 AT--CGAAGCAGTCATCGAGACCTACA---ACCTGCTGTCAGAGAAGTGGTTCACCCACG 878163 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || |||||||||| ||||| || || ||| ||| ||| |||| || |||||| Sbjct 878162 CCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGC 878103 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | | |||| ||| |||| || || | ||||| || ||| | || || || Sbjct 878102 TCGCCATGAAGGATGACAGCATCGAGGGGATCTACGACACGCTGAAGCATTGCGCCCTCA 878043 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| |||| || || || || || | ||| | | | | ||| ||| || Sbjct 878042 TCTCCAAATCAGCTGGAGGGATTGGCGTGGCAGTCAGCTGCATTAGATCCACGGGGAGCT 877983 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| ||| ||||| ||| |||||||| |||||||| ||| | |||| | ||||| Sbjct 877982 ACATCGCCGGCACCAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACA 877923 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | ||||| || || || ||||| || | || || | ||||| | || | Sbjct 877922 ACACAGCGCGTTATGTTGATCAGGGGGGGAACAAAAGACCTGGCGCCTTCGCCATGTACC 877863 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | |||||||||||| || ||| | ||| | || ||| |||||| || || | Sbjct 877862 TGGAGCCCTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGG 877803 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | || | ||||| ||||| |||||||| || ||| | || ||||| || ||||| | Sbjct 877802 AGGAGCAGCGAGCCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGC 877743 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||||| ||| | |||| || | ||||| || || ||||| ||| | Sbjct 877742 GGGTGGAGAACAACGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATG 877683 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || || | |||||||| | || | | || || | |||| | || | Sbjct 877682 AGTGCTGGGGGGAGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGA 877623 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | || || | ||| | |||| ||| || ||| | || ||| || || | Sbjct 877622 AGCGTGTGGTGAAGGCTCAGCAGCTTTGGTATGCAATCATCGAGTCGCAGACAGAAACCG 877563 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | ||||| ||||| | | ||| || | |||| ||| |||||||||| | || | Sbjct 877562 GGACGCCGTACATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGG 877503 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | |||||| || || || ||||| || || |||||||| ||| ||||||| Sbjct 877502 GCACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGG 877443 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672 | || || || || |||| ||| || || || || | || || | ||| || Sbjct 877442 TGGCGGTTTGCAATCTGGCCTCTGTCG--CTCTCAACAT--GTACGTCACCCCTGAGCGG 877387 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGA-TGGTCTTGAAC 94731 ||| | || || | | ||| | | | ||| | | ||| |||| Sbjct 877386 --ACTTAT------GA-CTTTAAAAAATTGGCATCCGTGACCAAAGTAATTGTCAGGAAC 877336 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 |||||| ||| ||||||| |||| |||||| || || || || || ||| || Sbjct 877335 TTGAACAAGGTTATCGACATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATG 877276 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 ||| |||| || || ||||| |||||||| || || || || | | | |||||| Sbjct 877275 CGGCACAGGCCGATAGGAATCGGGGTCCAGGGATTGGCTGATGCCTTCATCCTTATGCGT 877216 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||| || ||| || | || | | || || || | || ||| Sbjct 877215 TATCCCTTTGAAAGCCCCGAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTAT 877156 Query 94912 TACGGGGCCATGAAA-CAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATC 94970 || | || || || | | | | | | |||||| | || ||| | | || | Sbjct 877155 TATGCCGCTTTGGAAGCGAGCTG-CGAGTTGGCCG---CCGAGCTCGGCACCTATGAGAC 877100 Query 94971 GTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 || || ||||| || |||||||| | |||| |||| | |||| || ||| Sbjct 877099 GTATGAAGGCTCGCCGGTGAGTAAGGGCATTCTCCAGTACGACATGTGGGAGAAGACGCC 877040 Query 95031 CTCGGGTCTGTACGACTGGGAAGCT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAA 95087 ||| |||| |||||| ||||| || | | | ||| |||||| || |||| Sbjct 877039 AACGGACCTGTGGGACTGG-AAGCTGCTGAAGGAGAAGATCGC--CAAACATGGCGTGAG 876983 Query 95088 AAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAA 95147 ||| ||||| || |||| ||||||||||||||||| || |||||||| |||||||| Sbjct 876982 GAACAGCCTGCTGCTGTCCCCAATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAA 876923 Query 95148 CGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATT 95207 |||||| |||| ||| ||| |||| | |||| | | ||||||||| | ||||| || Sbjct 876922 CGAGTCCATCGAGGCCTACACAAGCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTT 876863 Query 95208 CCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAA 95267 | || ||||| ||||| || |||||||| ||| ||||| ||| | Sbjct 876862 TCAGATCGTCAACCCCCACCTGCTCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGA 876803 Query 95268 GGTCAAGAACCAACTGCTACGC-GCCAACGGCTCCGTCCAG 95307 | | |||||||| ||| | ||| ||| |||||| ||||| Sbjct 876802 GATGAAGAACCAGCTGAT-CGCTAACAATGGCTCCATCCAG 876763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494678452286560