Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq117 176 4e-39 >seq117 Length=2128962 Score = 176 bits (194), Expect = 4e-39 Identities = 927/1467 (63%), Gaps = 36/1467 (2%) Strand=Plus/Plus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 ||||| | || || || ||||||| | |||||||| |||| | ||| || | Sbjct 876830 AGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTG 876889 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || | ||||| ||| | | || | ||| ||||| ||||| || || || || |||| Sbjct 876890 TAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 876949 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCC 153188 || || ||||| | || || || |||| || ||| || || | ||| Sbjct 876950 GCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCC 877009 Query 153189 TTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAAC 153248 |||| | || ||| |||||||| ||| || ||| | ||||||||||||||| | Sbjct 877010 TTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGA 877069 Query 153249 ACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAG 153307 | || ||| | || ||| || |||| ||| ||||| || | ||||| Sbjct 877070 ATGCCCTTACTCACCGGCGAGCCTTCATACGTCTCATAGGTGCCGA-GCTCGGCGGCCAA 877128 Query 153308 TTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAAC 153367 |||||||| || || | ||| |||| || || || || ||| || | ||||| | Sbjct 877129 CTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAG 877188 Query 153368 GGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTG 153427 || || ||| || | || |||| || | ||||| || |||| ||||| Sbjct 877189 TTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAGGCATCAGCCAATCCCTG 877248 Query 153428 GATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATA 153487 || |||| || || || | ||| | ||| | ||| || | | || || Sbjct 877249 GACCCCGATTCCTATCGGCCTGTGCCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTA 877308 Query 153488 GTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAG 153547 || ||| ||||||| ||||| | ||| | || | ||||| || | | | Sbjct 877309 GTAGTTGATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCCAA 877368 Query 153548 TTTCTCGAAATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACG 153606 ||| | || ||||| ||| || | | ||||| || || | || | ||| | Sbjct 877369 TTTTTTAAAGTCATAAGTCCGCTCAGGGGTGACGTAC--ATG--TTGAGAGCGACAGAGG 877424 Query 153607 CCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGT 153666 ||||||| || || ||| ||| || | |||||| ||||| || | |||||||| Sbjct 877425 CCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGT 877484 Query 153667 TGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGA 153726 ||||||| || ||| ||||| ||| ||||| ||||| || | ||||| || |||||| Sbjct 877485 TGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGT 877544 Query 153727 AGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGT 153783 ||| ||||||||| ||||| || |||| |||| ||| | ||| | || | Sbjct 877545 AGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCAA---AGCT 877601 Query 153784 CCTGCGC--TC-GCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTC 153840 ||| || || ||| |||| | | ||||| |||| |||| ||| ||| Sbjct 877602 GCTGAGCCTTCACCACACGCTTC---ACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTT 877658 Query 153841 GCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCG 153900 |||||||| || || |||| || | || ||||| || | |||||||||||| | Sbjct 877659 CTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGG 877718 Query 153901 ACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACA 153960 |||| |||| | | || || |||||| || || || | ||| || ||||| | Sbjct 877719 ACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGA 877778 Query 153961 TGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCT 154018 ||||| | || | ||| |||||| ||| |||| ||||| | || | | Sbjct 877779 ACAGGTCCCTGGCTCGCTGC--TCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTC 877836 Query 154019 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCC 154075 | | | ||| ||||||||| || | ||| | ||| | ||| || | | || || Sbjct 877837 AAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCAGGTCTTTTGTTCCC 877896 Query 154076 GCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCT 154135 |||||||| || | ||| | | |||||| | || | || ||| || | || ||| | Sbjct 877897 CCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTT 877956 Query 154136 TGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTA-- 154193 | ||||||||| ||| | ||| || || | | | ||||| | | Sbjct 877957 GGAACAGCCGTTGGTGCCGGCGATGTAGCTCCC-----CGTGGATCTAATGCAGCTGACT 878011 Query 154194 ---ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAG 154250 |||||||| || || | | || || ||| ||||| | |||||| |||| Sbjct 878012 GCCACGCCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTCAGCGTGTCGTAG 878071 Query 154251 ATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATG 154310 || || |||||||| || || | | |||||| ||| || ||| ||||| || Sbjct 878072 ATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTG 878131 Query 154311 CGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATG 154370 ||||| || |||||||| || ||||| || ||| || | || || | Sbjct 878132 TTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGG 878191 Query 154371 CGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATG 154430 ||| || |||||| | |||||||||| ||||| || || | || || | |||| Sbjct 878192 TTGTAGGTCTCGATGACTGCTTCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATG 878251 Query 154431 AGCATGTGCTGCGGACGTTCGGCGACT 154457 ||||||||||||||||| || || ||| Sbjct 878252 AGCATGTGCTGCGGACGCTCAGCTACT 878278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496217513065920