Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq117 158 2e-33 seq64 89.7 8e-13 >seq117 Length=2128962 Score = 158 bits (174), Expect = 2e-33 Identities = 345/509 (68%), Gaps = 6/509 (1%) Strand=Plus/Plus Query 204103 GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAAC-C 204161 ||| ||||| |||| || ||||| || || ||||||| ||||| |||| | | Sbjct 876766 GATGGAGCCATTGTTAGCGATCAGCTGGTTCTTCATCTCCTCATTCCACAGGCCCCTCTC 876825 Query 204162 TGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTC 204221 || |||| || | |||||||||||||| ||||||||| || || || ||||||| | Sbjct 876826 TG-TCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGC 876884 Query 204222 GGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGG 204281 ||||| | | |||| | ||| | | |||| | |||||||||||| | ||||| |||| Sbjct 876885 GGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGG 876944 Query 204282 TGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCC 204341 || |||||||||||| || | ||| |||||| ||| | ||| || | ||| || | Sbjct 876945 TGGAGGCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCT 877004 Query 204342 TGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACT 204401 | |||||| ||||||| || | | || || ||||||||||| ||| Sbjct 877005 TCTCCTTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACT 877064 Query 204402 GAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAG-GCTGATCCTCTTCT 204460 | | ||||| | ||| || || ||| | |||||| ||| | || || ||| | Sbjct 877065 GGAGAATGCCCTTACTCACCGGCGAGCCTTCATACGTCTCATAGGTGCCGA-GCTCGGCG 877123 Query 204461 GCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTT 204520 |||| || ||| || ||| ||| ||| ||||| |||||||||||||| | | || Sbjct 877124 GCCAACTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATG-TT 877182 Query 204521 AATCTGGCG-GCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCAA 204579 | | | | ||||| | | ||||| | || || | | || | || ||||| Sbjct 877183 GAGCAGTTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAGGCATCAGCCAA 877242 Query 204580 GCCCTGCACTCCGATTCCCAACGGTCTGT 204608 ||||| || |||||||| | ||| |||| Sbjct 877243 TCCCTGGACCCCGATTCCTATCGGCCTGT 877271 Score = 104 bits (114), Expect = 4e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | ||| |||| ||| || || || |||| Sbjct 875796 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTCAGCTTGCCGTAGTTCGGCTCTGCTATGT 875855 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | |||||||| |||||||| ||||||||| | | | | || || |||||||| |||| | Sbjct 875856 GGATGTTCAGGGACTGGCTCTGGTCGATGTAGGCCCCACGGTCGGCGGCCATCTTGACTA 875915 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || ||||| || ||||||||||| || ||| Sbjct 875916 CAGTTTTCTGTGAGATCTCCCACACGGTTTTG 875947 >seq64 Length=3290765 Score = 89.7 bits (98), Expect = 8e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973 || ||| || || | ||||||| | ||||| | ||| || || || |||||||| Sbjct 2552197 CTTCCAGCCATAGAAGTGCATGCTACTAAGTTTTCCATAGTTTGGCTCAGCAATGTGAAT 2552138 Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGT 204033 ||| || |||||||||||||| ||| | | | |||||||| ||||| |||| | || Sbjct 2552137 GTTAAGCGACTGGCTTTGGTCAATGTATGCACCACGATCTGCTGCCATCTTGAGGACCGT 2552078 Query 204034 CTTCTGCGAAATCTCCCACACCGTCTT 204060 |||||| || || |||||||| || || Sbjct 2552077 CTTCTGGGAGATTTCCCACACAGTTTT 2552051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795083278212160