Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq80 98.7 2e-15 seq249 96.9 8e-15 >seq80 Length=2822622 Score = 98.7 bits (108), Expect = 2e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| ||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 765076 CAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 765135 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTC 199515 |||||||||||| || || ||||| || | ||||||||| Sbjct 765136 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTC 765174 >seq249 Length=855460 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 199420 GACAAGGTGGAGAGTCGACTCCTTTTGGAC-GTTGTAGTCAGCCAAAGTCCTTCCATCTT 199478 |||||||||||| || || | |||| ||||||||||| | || ||||||| Sbjct 398403 GACAAGGTGGAGGGTGGAGT-----TGGAGTGTTGTAGTCAGAGAGGGTGTGGCCATCTT 398349 Query 199479 CCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCT 199538 |||||||||| || || ||||| || | ||||||||| || || ||||| |||| Sbjct 398348 CCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCT 398289 Query 199539 GAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCT 199598 | || || ||||| | || | |||||| | | || || |||| ||||| |||| Sbjct 398288 GGATTTTGGCCTTCAAGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCT 398229 Query 199599 TACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| || || ||||| || || Sbjct 398228 TACCAGTGAGGGTCTTGACAAAGATCTG 398201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178812300704812