Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq249 86.0 7e-12 seq80 86.0 7e-12 >seq249 Length=855460 Score = 86.0 bits (94), Expect = 7e-12 Identities = 132/187 (71%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 46408 TTGGA-TATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCA 46466 ||||| | |||||||| || || ||| | | || || ||||||||||| || || |||| Sbjct 398384 TTGGAGTGTTGTAGTCAGAGAGGGTGTGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCA 398325 Query 46467 AGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCA 46526 | ||||||||| | || | || ||||| ||| ||| || ||| | || | | Sbjct 398324 GCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATTTTGGCCTTCAAGTTCTCAA 398265 Query 46527 CCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGA 46586 ||||| || | || || |||| |||||||| || || || || || || ||||||| Sbjct 398264 TGGTGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGA 398205 Query 46587 TTTGCAT 46593 | ||||| Sbjct 398204 TCTGCAT 398198 >seq80 Length=2822622 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||||||||| || |||| | ||||||||| | || | || |||||| ||| | Sbjct 742253 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGG 742312 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || ||||| || | | ||||| || | || || || | |||||||| || Sbjct 742313 ATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTA 742372 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || || ||||| |||||||| ||||| || Sbjct 742373 CCAGTTAGGGTTTTCACAAAGATCTGCATGTT 742404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565187274186720