Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq49 307 8e-78 seq91 93.3 3e-13 >seq49 Length=3574795 Score = 307 bits (340), Expect = 8e-78 Identities = 956/1467 (65%), Gaps = 12/1467 (1%) Strand=Plus/Plus Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308 ||| || |||| | ||||| ||||| || |||||||| | ||||||||| || || || Sbjct 154843 TTTGTCCACGGCGGATACATTTAGAATGCCGTTGGCATCAATATCAAATGTTACCTCTAT 154902 Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368 || || || |||| |||| || ||||| ||| | | |||| | |||||| || Sbjct 154903 CTGTGGAACACCTCGGGGAGCTGGAGGGATACCTGTGAGGTCAAATTTGCCCAGAAGGTT 154962 Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428 || ||| || | || || || || || | || || || | | || || Sbjct 154963 GTTGCATTTGGTCATGGCTCTCTCGCCTTCAAATACCTGAATCAATACACCTGGCTGGTT 155022 Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 517487 |||||| || || | || | |||| | | || || ||||| ||||||| | | Sbjct 155023 ATCTGAGTATGTGGAGAAGA-TCTGAGTCTGCTTTGTGGGGATTGTGGTGTTTCGCTTTA 155081 Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547 | | | ||||||| ||| ||||| ||||| | || ||||| || |||| |||||| | Sbjct 155082 TCAGAGGTGTCATAACACCGCCTGCGGTTTCAATGCCCAGAGACAGGGGAGCGACATCCA 155141 Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607 || | | || ||| | || || || | || | || || |||||||| | | Sbjct 155142 GCAGCAGCAGATCTTGGACATTCTCTGAGGTGTCGCCCATGAGGATGGCTGCTTGGACTG 155201 Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667 | ||||| || || ||||||||||| || |||| | | || || | ||| ||||| | Sbjct 155202 CTGCACCGTAGGCTACAGCTTCATCTGGGTTAATGCTCTTGTTCAGGTCTTTGCCATTAA 155261 Query 517668 AAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726 | || | || |||| || | | || ||||| | | || || ||||| | ||| Sbjct 155262 AGAAGTCCTGTAAGAGCTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACA 155320 Query 517727 ATTTCATGCA-CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 517785 |||||||| | |||| ||||||||||| || | |||| | |||| ||||| || | Sbjct 155321 ATTTCATGAATCCTG-GATTTATCCAGCTTGGCATCCTGCAGGGCTTTCTCAACTGGGCC 155379 Query 517786 AAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC 517845 ||| | || || | ||||| || || || || || || || | | | Sbjct 155380 AAGTGTTCCCCTGAAAAGATCTGAGTTGAGCTCCTCAAAACGTGCCCTTGTGATGGAGGT 155439 Query 517846 ATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGA 517905 | | |||||||||| || || | ||| |||| ||||| | | ||||| || || Sbjct 155440 GTAAAAATCAATTCCCTCAAAGAGAGAGTCAATCTCAATGCTTGCCTGAGTGCTGGAGGA 155499 Query 517906 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 517965 || | | || || | ||||| ||||| | | ||| | | ||| | || ||| Sbjct 155500 TAAGGTCCTCTTTGCCCTCTCACAAGCTGTACGCAATCTCCTCACTGCTCT--CTTATTC 155557 Query 517966 ATTCAAATCTGTTT--TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 518023 | ||| | || ||| |||||| || || || || ||| | | || | | Sbjct 155558 TGGCTAATGTCCTTCTTATGTTTTCTTTTAAATTCCTCTACAAAGTGCTTGACCATTTGG 155617 Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083 || ||||| || || || || | | || | |||||| || || | || | || | Sbjct 155618 TTGTCAAAGTCCTCCCCACCAAGGTGTGTGTCTCCTGAAGTGGCCTTGACCTCAAAGATG 155677 Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 ||| |||||| | || || || |||||| ||| || || || | |||||| || || Sbjct 155678 CCAGCTTCAATGGTCAGAATAGACACATCAAAGGTGCCTCCGCCAAGATCAAAGATCAGC 155737 Query 518144 ACATTCATTTCTT-TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202 ||||| |||| ||| ||| ||| ||| || ||||| |||| || || || || || Sbjct 155738 ACATTGCGTTCTCCTGTTTTGCCTTT-ATCCAGGCCATATGCAATGGCTGCTGCTGTGGG 155796 Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262 |||||||| || |||| |||||| || |||| || || ||||| || || ||||| Sbjct 155797 CTCATTAATGATCCTCAGAACATTTAGTCCAGAGATCACCCCAGCATCCTTGGTAGCTTG 155856 Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACC 518322 ||| || || ||||| ||||| || || || || || || || | | || || || Sbjct 155857 TCTCTGGGAGTCGTTGAAATAAGCTGGCACTGTGATGACTGCGTTTGACACCCTTTGTCC 155916 Query 518323 AATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 | || || || | | ||||||||| | | ||| || ||||||| || || Sbjct 155917 CAGGTAGGCCTCAGCTATCTCCTTCATTTTAACCAGGACCATGGAGGAAATTTCCTCAGG 155976 Query 518383 GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 518442 | || ||||| || || ||| || | | | || || | | | | Sbjct 155977 ATAGAATGCCTTGGTCTCCCCTTTGTATTCCACCTGGACTTTGGGCTTTCCATTATCGTC 156036 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502 ||| || || || |||||| ||||| || || || || | |||||||||| | ||| Sbjct 156037 AATCACCTTGAAAGGCCAGAGCTTCATGTCGGACTGTACGACTGGGTCATTAAACTTTCT 156096 Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 ||||| | ||||| |||||||| || || || | || || |||||| |||| | || Sbjct 156097 TCCAATCAGCCGTTTGGCATCAAAGATTGTGTTATTGGGGTTCATTGCAACTTGGTTCTT 156156 Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 518622 ||| ||||||||||| || |||||| || ||||| | ||||| |||||| || | Sbjct 156157 GGCAGCATCTCCAATAAGCCTTTCTGTGTCGGTAAAAGCCACATAGCTTGGAGTGGTTCT 156216 Query 518623 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 518682 ||| || ||||| || ||||| || |||||||| |||| || | || || |||||| Sbjct 156217 ATTGCCCTGATCGTTGGCAATGATCTCAACTTTGCCATGCTGGAAAACCCCAACACAAGA 156276 Query 518683 AAAAGTTGTTCCTAAATCAATACCAAT 518709 | | || || || | |||||| ||||| Sbjct 156277 ATAGGTGGTGCCCAGATCAATGCCAAT 156303 >seq91 Length=2534605 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 ||||| || || ||||| |||| |||||||| || || ||||| || || | | ||| Sbjct 480092 TTTTTGTCCAGGCCATAGGCAATGGCAGCAGCGGTGGGCTCATTGATGATACGAAGGACA 480033 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 ||||| |||| ||| | ||||||||||| ||||| || | || || ||||| || || Sbjct 480032 TTAAGCCCAGAAATGGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCGTTGAAGTAG 479973 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC 518313 ||||| ||||| | ||| || ||||| Sbjct 479972 GCAGGCACAGTCACTACGACACTTGTTAC 479944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780463325844616