Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq87 141 8e-29 seq167 105 5e-18 >seq87 Length=2632686 Score = 141 bits (156), Expect = 8e-29 Identities = 137/175 (78%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 |||||| ||||||||||| || || |||||||||||||| || ||||| ||||| ||||| Sbjct 460176 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGTCCTAGGTC 460117 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 |||||||| |||| ||| || ||||||| |||| | || |||||||| || Sbjct 460116 ACCCTCTTCTCTGTCAGTGAACCCAAGGTTGTCCAGGAAGTTCCGAGACCCGTTGGCATC 460057 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30323 ||||||||| || || || || || ||||| ||||| ||||| || |||| |||| Sbjct 460056 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 460002 Score = 122 bits (134), Expect = 7e-23 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 29880 GTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCC 29939 ||| || |||||||| || || || || |||||||||||||| || || ||||| | || Sbjct 460978 GTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGCACCCCTAATCC 460919 Query 29940 CATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTG 29999 ||| || | || | |||||| ||||||||||| ||||| ||||||| |||||| ||||| Sbjct 460918 CATATCAGCAGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCACACGTAGAACTG 460859 Query 30000 ACACATGGTGTGGCACGGAGGAAGAGCCAT 30029 || | | |||||| || || || ||||| Sbjct 460858 GCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 460829 >seq167 Length=1420731 Score = 105 bits (116), Expect = 5e-18 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166 || |||||||||||| | ||| | |||| ||||||||||| ||||| || |||||||| Sbjct 1227006 CTTCCTGCTGAGGACAATGTTGACTCTGTTGCTCAGAGGTCTGTTCTTCTCTGGGATGGA 1227065 Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 | |||| ||||| | ||||| |||||||| |||||||||||| Sbjct 1227066 GTACCACGTCTTCTTGCCCATGATCACCACATTCTGCTTGCCT 1227108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408581564524628