Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq117 217 2e-51 seq64 91.5 2e-13 seq28 91.5 2e-13 >seq117 Length=2128962 Score = 217 bits (240), Expect = 2e-51 Identities = 961/1494 (64%), Gaps = 48/1494 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| |||| || | || ||||||||| || || || | ||| Sbjct 878265 CCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGATATCGAAGCAGTC 878206 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||| | | || ||||| ||||| | || |||||||| Sbjct 878205 ATCGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCGACCCTCTT 878147 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||||||| || || |||||| ||||||| |||||||| |||||| ||||| || Sbjct 878146 CAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 878087 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || ||||| | || || | | | || || | ||||| || | ||||| Sbjct 878086 CAGCATCGAGGGGATCTACGACACGCTGAAGCATTGCGCCCTCATCTCCAAATCAGCTGG 878027 Query 75451 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCAATAA-ATCTCGTATTCGGGGGAC 75507 || ||||| || || || | || | ||| ||| | || || || || Sbjct 878026 AGGGATTGGCGTGG-CAGTCA-GCTGCATTAGATCCACGGGGAGCTAC-ATCGCCGGCAC 877970 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || || || | || | | |||||| | | || | ||| ||||||||| || Sbjct 877969 CAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTA 877910 Query 75568 TGTAAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 ||| |||| | |||| | ||| || || |||| | ||| |||| || |||| Sbjct 877909 TGTTGATCAGGGGGGGAA-CAAAAGACCTGGCGCCTTCGCCATGTACCTGGAGCCCTGGC 877851 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 | |||| | | || ||||| ||| | | || ||| || | || ||| || Sbjct 877850 ACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAG-AACACGGGAAAGGAGGAGCAGCGA 877792 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 || || || || | |||||||||| || ||||| |||||||||||||| ||| | Sbjct 877791 GCCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAAC 877732 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA-CGCGGTGGG 75801 | | ||||| || | ||||| | | | || || || || || | ||| Sbjct 877731 AACGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTG-GGG 877673 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 ||||||||||||| |||||||| | ||||| ||||||| || | || ||| || Sbjct 877672 GGAGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGAA-GCGTGTGG 877614 Query 75862 ACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 || | | | | ||||| | || || || | || ||||| || || || || || | Sbjct 877613 TGAAGGCTCAGCAGCTTTGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGT 877554 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 | ||| | ||||| ||||| || |||| |||||| ||||| ||||| |||| || |||| Sbjct 877553 ACATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCA 877494 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 || || || || ||||||||||| | |||||||| ||||| ||| ||| |||| Sbjct 877493 AGTGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTT 877434 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATT 76100 ||||| |||| || |||| || | ||| |||| ||| || |||| ||| | Sbjct 877433 GCAATCTGGCCTCTGTCGCTCTCAACATGTACGTCACCCCTGAG---CGGACTTATGACT 877377 Query 76101 ATGAAAAACT-TCAT--GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157 | ||||| | ||| | | || | ||||| || || | ||| || || | Sbjct 877376 TTAAAAAATTGGCATCCGTGACCAAAGTAATTGT---CAGGAACTTGAACAAGGTTATCG 877320 Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217 ||| || | || || || || || | | ||| || ||||| ||||| || || | Sbjct 877319 ACATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGGCACAGGCCGATAG 877260 Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCA 76276 | | || || || || | || |||| || || || || || || | ||||| Sbjct 877259 GAATCGGGGTCCAGGGATTGGCTGATGCCTTCATCCTTATG-CGTTATCCCTTTGA---- 877205 Query 76277 GATGAAGCCAAGGAGATGAA-TGCT-------CGTATCTTTGAAACCATGTATCACGCAT 76328 ||||| | | | || |||| | |||||||| || |||||| | || Sbjct 877204 ----AAGCCCCGAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTATGCCG 877149 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | |||| ||||| || || ||||| | | | || |||||||||| | ||| || | Sbjct 877148 CTTTGGAAGCGAGCTGCGAGTTGGCCGCCGAGCTCGGCACCTATGAGACGTATGAAGGCT 877089 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA-GCTCAAC 76447 | || | | | || | || |||| || ||||||| || || |||| | | Sbjct 877088 CGCCGGTGAGTAAGGGCATTCTCCAGTACGACATGTGGG-AGAAGACGCCAACGGACCTG 877030 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 | |||||| | | || ||||| ||| | | || | | ||||| || || Sbjct 877029 TGGGACTGGAAGCTGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTG 876970 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 || | |||||||| || ||||||||||| || ||| |||| || || || | | | || Sbjct 876969 CTGTCCCCAATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAG 876910 Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627 | ||||||| ||||||||| | | ||| | || |||||| || |||||| Sbjct 876909 GCCTACACAAGCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCAGATCGTCAAC 876850 Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681 ||||| |||| ||||| | ||| || || ||| |||| |||||| Sbjct 876849 CCCCACCTGCTCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGAGATGAAG 876796 >seq64 Length=3290765 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| || ||||| |||||||| ||| ||||||||||||| || |||| |||||| Sbjct 2550622 TCGCAGACAGAAACTGGTACACCATACATGGTTTACAAGGATGCCTGCAACAGAAAGAGT 2550681 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 || || | || |||| || ||||| | ||||| ||||| || || |||||||| Sbjct 2550682 AATCAGCAAAACCTGGGCACCATCAAATCCAGCAATCTGTGCACAGAGATCGTAGAGTAC 2550741 Query 76016 ACAGATAAGGATGAG 76030 || || |||||| Sbjct 2550742 ACGAGCAAAGATGAG 2550756 >seq28 Length=5070235 Score = 91.5 bits (100), Expect = 2e-13 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GC 65135 ||||| || | || ||||| |||||| || ||||||||||| || ||||| ||| || Sbjct 3408805 GAGCGGATTGTGGCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGTTCATT-TGCTGC 3408863 Query 65136 TATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTAT 65195 ||| || ||| |||||||| |||| || ||||| ||||| ||| ||| || || || || Sbjct 3408864 TATCTACTGGCTGAAGAAGAGGGGGCTAATGCCTGGCCTTAGCTACTCCAACGAGCTCAT 3408923 Query 65196 TTCCCGAGATGAGG 65209 | | | ||||||| Sbjct 3408924 TAGCAGGGATGAGG 3408937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596515640279680