Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq117 145 7e-30 >seq117 Length=2128962 Score = 145 bits (160), Expect = 7e-30 Identities = 962/1527 (63%), Gaps = 51/1527 (3%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | || |||||| || || | | || || || ||| |||||| | ||| | | Sbjct 876850 GTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGC 876909 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| | || |||||||| ||||| ||||| || |||| || || ||||| | || Sbjct 876910 CTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAG 876969 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 || || |||| | || || ||| ||||| ||| | ||||||||| Sbjct 876970 CAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCA 877029 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 || || | || | || | |||||| |||||||| | || ||| ||| | || Sbjct 877030 CAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGA 877089 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800 |||||| |||| || || || | ||| ||||||||| |||||| || | || Sbjct 877090 GCCTTCATACGTCTCATAGGTGCCGAGCTCGGCGGCCAACTCGCAGCTCGCTTCCAAAGC 877149 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860 |||| || ||||| || ||||| ||||||| | | ||||||| ||| || | Sbjct 877150 GGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCAAA 877209 Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920 || || | | |||| || || |||| || || || || | ||| | || | Sbjct 877210 GGGATAACGCATAAGGATGAAGGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGCCT 877269 Query 138921 ATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTT 138980 || |||| || ||| | || |||| | || || ||||| | ||||| | || Sbjct 877270 GTGCCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCTT 877329 Query 138981 GTTTAAATTTCGCACGACCACCTTAGTC--GTATGCTTTAATCGTTCAAAATCGTATGTG 139038 ||| || || | || | || || ||| | |||| ||| || ||| || || || Sbjct 877330 GTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCC--AATTTTTTAAAGTCATAAGTC 877387 Query 139039 CCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCAC 139098 | | | | || ||||| ||| |||||| | | ||||| | ||||| Sbjct 877388 CGCTCAGGG--GT----GACGT--ACA----TGTTGAGAGCGACAGAGGCCAGATTGCAA 877435 Query 139099 ACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTG 139158 |||||||| ||||| | |||| ||||| ||||| | || | || || |||||| Sbjct 877436 ACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTG 877495 Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218 || || || | ||| || || ||||| || | ||| || ||||||||||| | ||| ||| Sbjct 877496 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTAC 877555 Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTAT-AATGAATTTGAACAAGTCCCTAGCTTGTAT 139277 || || || ||||| || | ||| || | || || || | | | ||| | | Sbjct 877556 GGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCAA-AGCTGCTGAGCCTTCA- 877613 Query 139278 TTGACGCACGTAAAGTT--CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCA 139335 || | | | | | | || ||| || | ||||||||| || || || Sbjct 877614 -CCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCC 877672 Query 139336 CCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTC 139395 || || ||| || || | || | | | |||||||| || ||||| | |||| Sbjct 877673 CCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCGTTG 877732 Query 139396 GCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCC 139455 || || ||| ||||||| || || || ||||||| ||| | | || || | || Sbjct 877733 TTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCTGGCT 877792 Query 139456 TTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGC 139515 || || ||| ||| |||| |||| | ||||| ||||| || || |||| Sbjct 877793 CGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGC 877852 Query 139516 CATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGT 139572 || || ||||| || ||||| | ||||| | |||| || || ||||| || | Sbjct 877853 CAGGGCTCCAGGTACATGGCGAAGGCGCCAGGTCTTTTGTTCCCCCCCTGATCAACATAA 877912 Query 139573 CGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTG 139632 || | | || ||| | || | |||||| || | || ||| | | ||||||||| Sbjct 877913 CGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTG 877972 Query 139633 CTACGGATGGGACTGTTGCGAGCTC-----GGACGTCATGTA---CATTG--ATGCCGAT 139682 | || | || ||| ||||| ||| | ||| | | || | ||| || Sbjct 877973 C--CG---GCGA-TGT----AGCTCCCCGTGGATCTAATGCAGCTGACTGCCACGCCAAT 878022 Query 139683 TCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTA 139741 || || | ||||||| || | |||||| || | | || ||||| || || | Sbjct 878023 CCCTCCAGCTGATTTGGAGATGAGGGCGCAAT-GCTTCAGCGTGTCGTAGATCCCCTCGA 878081 Query 139742 TGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGG 139801 ||||||| |||| ||| | || ||| ||||| || || ||||| || || || | Sbjct 878082 TGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAG 878141 Query 139802 CTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCAATTCGTACGTT 139860 | || || || || ||||| ||||| || || | | |||| || | ||| || Sbjct 878142 CATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCT-GACAGCAGGTTGTAGGTC 878200 Query 139861 TCGATGGC-GCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919 |||||| | ||| | |||||| | |||||||| || |||| || | ||| ||||| || Sbjct 878201 TCGATGACTGCT-TCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATGAGCATGTG 878259 Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTT 139979 || || || || || ||| | ||| ||| ||| || | ||| || ||||| Sbjct 878260 CTGCGGACGCTCAGCTACTTTGCCATTGATCTTTAGCAGGTAGGAGCGCTCCAGAGTCTT 878319 Query 139980 GTAGCCAAAGTACCTATAGTTGAAATC 140006 | |||||||| | | ||| |||||| Sbjct 878320 GAAGCCAAAGAAGTTGTAGGAGAAATC 878346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449856906762080