Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq249 100 2e-16 seq80 84.2 1e-11 >seq249 Length=855460 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 34794 GAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTC 34853 || |||| ||||| || ||| || | |||| ||||| ||||| || || |||||||| | Sbjct 398381 GAGTGTTGTAGTCAGAGAGGGTGTGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCC 398322 Query 34854 GTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCG 34913 |||||||| | || | || ||||| || | ||||| || | | | || | Sbjct 398321 TCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATTTTGGCCTTCAAGTTCTCAATGG 398262 Query 34914 ATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCT 34973 ||| ||| ||| || || | || |||||||| || ||||||||||| |||||||||| Sbjct 398261 TGTCACTGGGCTCAACCTCCAGAGTGATGGTCTTACCAGTGAGGGTCTTGACAAAGATCT 398202 Query 34974 GCATG 34978 ||||| Sbjct 398201 GCATG 398197 >seq80 Length=2822622 Score = 84.2 bits (92), Expect = 1e-11 Identities = 111/152 (73%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| ||||| |||||||| | |||||||| | || | |||||||| || | Sbjct 742253 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGG 742312 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 ||||| ||||| || || || | ||| ||| ||| || || | || ||||||| Sbjct 742313 ATTTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCT 742370 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || || ||||| || ||||||||||||||| Sbjct 742371 TACCAGTTAGGGTTTTCACAAAGATCTGCATG 742402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325664077559084