Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq49 313 2e-79 seq91 98.7 7e-15 >seq49 Length=3574795 Score = 313 bits (346), Expect = 2e-79 Identities = 957/1467 (65%), Gaps = 12/1467 (1%) Strand=Plus/Plus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 ||| || |||| | ||||| ||||| || |||||||| | ||||||||| || || || Sbjct 154843 TTTGTCCACGGCGGATACATTTAGAATGCCGTTGGCATCAATATCAAATGTTACCTCTAT 154902 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 || || || |||| |||| || ||||| ||| | | |||| | |||||| || Sbjct 154903 CTGTGGAACACCTCGGGGAGCTGGAGGGATACCTGTGAGGTCAAATTTGCCCAGAAGGTT 154962 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 || ||| || | || || || || || | || || || | | || || Sbjct 154963 GTTGCATTTGGTCATGGCTCTCTCGCCTTCAAATACCTGAATCAATACACCTGGCTGGTT 155022 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 281654 |||||| || || | || | |||| | | || || ||||| ||||||| | | Sbjct 155023 ATCTGAGTATGTGGAGAAGA-TCTGAGTCTGCTTTGTGGGGATTGTGGTGTTTCGCTTTA 155081 Query 281655 TAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 281714 | | | ||||||| ||| || || ||||| | || ||||| || |||| |||||| | Sbjct 155082 TCAGAGGTGTCATAACACCGCCTGCGGTTTCAATGCCCAGAGACAGGGGAGCGACATCCA 155141 Query 281715 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 281774 || | | || ||| | || || || | || | || || |||||||| | | Sbjct 155142 GCAGCAGCAGATCTTGGACATTCTCTGAGGTGTCGCCCATGAGGATGGCTGCTTGGACTG 155201 Query 281775 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 281834 | ||||| || || ||||||||||| || |||| | | || || | ||| ||||| | Sbjct 155202 CTGCACCGTAGGCTACAGCTTCATCTGGGTTAATGCTCTTGTTCAGGTCTTTGCCATTAA 155261 Query 281835 AAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 | || | || |||| || | | || ||||| | | || || ||||| | ||| Sbjct 155262 AGAAGTCCTGTAAGAGCTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACA 155320 Query 281894 ATTTCATGCA-CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 281952 |||||||| | |||| ||||||||||| || | |||| | |||| ||||| || | Sbjct 155321 ATTTCATGAATCCTG-GATTTATCCAGCTTGGCATCCTGCAGGGCTTTCTCAACTGGGCC 155379 Query 281953 AAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC 282012 ||| | || || | ||||| || || || || || || || | | | Sbjct 155380 AAGTGTTCCCCTGAAAAGATCTGAGTTGAGCTCCTCAAAACGTGCCCTTGTGATGGAGGT 155439 Query 282013 ATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGA 282072 | | |||||||||| || || | ||| |||| ||||| | | ||||| || || Sbjct 155440 GTAAAAATCAATTCCCTCAAAGAGAGAGTCAATCTCAATGCTTGCCTGAGTGCTGGAGGA 155499 Query 282073 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 282132 || | | || || | ||||| ||||| | | ||| | | ||| | || ||| Sbjct 155500 TAAGGTCCTCTTTGCCCTCTCACAAGCTGTACGCAATCTCCTCACTGCTCT--CTTATTC 155557 Query 282133 ATTCAAATCTGTTT--TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190 | ||| | || ||| |||||| || || || || ||| | | || | | Sbjct 155558 TGGCTAATGTCCTTCTTATGTTTTCTTTTAAATTCCTCTACAAAGTGCTTGACCATTTGG 155617 Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| || || || || | | || | |||||| || || | || | || | Sbjct 155618 TTGTCAAAGTCCTCCCCACCAAGGTGTGTGTCTCCTGAAGTGGCCTTGACCTCAAAGATG 155677 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||| |||||| | || || || |||||| ||| || || || | |||||| || || Sbjct 155678 CCAGCTTCAATGGTCAGAATAGACACATCAAAGGTGCCTCCGCCAAGATCAAAGATCAGC 155737 Query 282311 ACATTCATTTCTT-TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 ||||| |||| ||| ||| ||| ||| || ||||| |||| || || || || || Sbjct 155738 ACATTGCGTTCTCCTGTTTTGCCTTT-ATCCAGGCCATATGCAATGGCTGCTGCTGTGGG 155796 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 |||||||| || |||| |||||| || |||| || || ||||| || || ||||| Sbjct 155797 CTCATTAATGATCCTCAGAACATTTAGTCCAGAGATCACCCCAGCATCCTTGGTAGCTTG 155856 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCC 282489 ||| || || ||||| ||||| || || || || || || || | || || || ||| Sbjct 155857 TCTCTGGGAGTCGTTGAAATAAGCTGGCACTGTGATGACTGCGTTTGACACCCTTTGTCC 155916 Query 282490 AATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 | || || ||| | | ||||||||| | | ||| || ||||||| || || Sbjct 155917 CAGGTAGGCCTCAGCTATCTCCTTCATTTTAACCAGGACCATGGAGGAAATTTCCTCAGG 155976 Query 282550 AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 282609 | | || ||||| || || ||| || | | | || || | | | | Sbjct 155977 ATAGAATGCCTTGGTCTCCCCTTTGTATTCCACCTGGACTTTGGGCTTTCCATTATCGTC 156036 Query 282610 AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 282669 ||| || || || ||||| ||||| || || || || | |||||||||| | ||| Sbjct 156037 AATCACCTTGAAAGGCCAGAGCTTCATGTCGGACTGTACGACTGGGTCATTAAACTTTCT 156096 Query 282670 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTT 282729 ||||| | ||||| |||||||| || || || | || || | |||| |||| | || Sbjct 156097 TCCAATCAGCCGTTTGGCATCAAAGATTGTGTTATTGGGGTTCATTGCAACTTGGTTCTT 156156 Query 282730 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 282789 ||| ||||||||||| || |||||| || ||||| | ||||| |||||| || | Sbjct 156157 GGCAGCATCTCCAATAAGCCTTTCTGTGTCGGTAAAAGCCACATAGCTTGGAGTGGTTCT 156216 Query 282790 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 282849 ||| || ||||| || ||||| || |||||||| |||| || | || || |||||| Sbjct 156217 ATTGCCCTGATCGTTGGCAATGATCTCAACTTTGCCATGCTGGAAAACCCCAACACAAGA 156276 Query 282850 AAAAGTTGTTCCTAAATCAATACCAAT 282876 | | || || || | |||||| ||||| Sbjct 156277 ATAGGTGGTGCCCAGATCAATGCCAAT 156303 >seq91 Length=2534605 Score = 98.7 bits (108), Expect = 7e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || || ||||| |||| |||||||| || || ||||| || || | | ||| Sbjct 480092 TTTTTGTCCAGGCCATAGGCAATGGCAGCAGCGGTGGGCTCATTGATGATACGAAGGACA 480033 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 ||||| |||| ||| | ||||||||||| ||||| || | || || ||||| || || Sbjct 480032 TTAAGCCCAGAAATGGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCGTTGAAGTAG 479973 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 ||||| ||||| | ||| || |||||| Sbjct 479972 GCAGGCACAGTCACTACGACACTTGTTAC 479944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740275142979336