Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq10 86.0 7e-12 >seq10 Length=7009280 Score = 86.0 bits (94), Expect = 7e-12 Identities = 133/188 (71%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 |||| ||| | || || || |||||| || |||||||| | ||||||| ||| | Sbjct 1152372 GCCAATTCCTTGGGCGAGCTGAAGTCGTCAACATGAATGAAGGAGTCTCCCTGGATAAAG 1152431 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || |||||||||| || | || ||||| || | || || | || | | |||| Sbjct 1152432 TTCTCGTAATTCTGCCTGGGTGGGCCGAGAACCACTGGCACTGTCCCCAC--TGAGAGTG 1152489 Query 177066 CG--GTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGA 177123 | ||| ||||| || ||||| || || |||| | ||||||||||||||| ||||||| Sbjct 1152490 GGTTGTACAGTTTCTCAGTAATGTAATCTTTGTGGATGGAGTTCTCAAACGCCAGATAGA 1152549 Query 177124 ATTTACAG 177131 | || ||| Sbjct 1152550 ACTTGCAG 1152557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578379680825600