Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq117 170 2e-37 >seq117 Length=2128962 Score = 170 bits (188), Expect = 2e-37 Identities = 961/1512 (64%), Gaps = 50/1512 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | |||||||| |||| ||||| || | | || | ||||| ||| | | | Sbjct 876851 TTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCC 876910 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || ||||| | || ||||| |||| || || ||||| | || | Sbjct 876911 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAGC 876970 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || || | ||| || ||||||| || || ||||||||| Sbjct 876971 AGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCCA 877029 Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131 || || |||||| | |||||||||||||||||| | || ||| | || Sbjct 877030 CAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGA 877089 Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG-CCAATTCACAGCTTGCCTCGAGCG 147190 ||| | |||| ||| | ||| || | ||| |||| || ||||| || || | | Sbjct 877090 GCCTTCATACGTCTCATAGGTGCCGA-GCTCGGCGGCCAACTCGCAGCTCGCTTCCAAAG 877148 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250 | |||| || || || || ||| || |||| || | || || ||| || Sbjct 877149 CGGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCA- 877207 Query 147251 AAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 |||| ||| |||| ||| | |||||||| ||||| ||||||| |||| || || || Sbjct 877208 AAGGGATAACGCATAAGGATGAAGGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGC 877267 Query 147310 CGATGC----TTTTCGT--TGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCA 147363 | ||| | |||| | ||| ||||| | | || |||| |||| || Sbjct 877268 CTGTGCCGCATGTTCGACCTCCTG-GCTTCTTCCACC-----GGGTAGTAGTTGATGTCG 877321 Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423 |||| |||||| | ||| | || | ||||| || | | | | ||| | || ||| Sbjct 877322 ATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCCAATTTTTTAAAGTCA 877381 Query 147424 TAAGTCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 ||||||| || | |||||| || ||| | |||| ||| ||||||||||| || Sbjct 877382 TAAGTCCGCTCAGGGGTGACGTAC--AT--GTTGAGAGCGACAGAGGCCAGATTGCAAAC 877437 Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 ||| ||| || | |||||| |||||||| | ||| ||||||||||| || || Sbjct 877438 CGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGAT 877497 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 | |||| ||| ||||| ||||| |||| ||||| || |||||| ||| ||||||||| Sbjct 877498 GGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGG 877557 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGC--TC-G 147656 ||||| || |||| || | ||| | ||| | || | ||| || || Sbjct 877558 CGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCAA---AGCTGCTGAGCCTTCAC 877614 Query 147657 CACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTC 147716 ||| |||| | | ||||| || || || | ||| | |||||||| || Sbjct 877615 CACACGCTTC---ACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTC 877671 Query 147717 GCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTC 147776 || |||| || | || ||||| || | |||||||||||| ||||| ||| || Sbjct 877672 CCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCA---GTCTTC 877728 Query 147777 CGCGTT---AACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC- 147832 ||| || || ||| || || || || | |||||| ||||| | || || | Sbjct 877729 GTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCT 877788 Query 147833 -GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCG 147891 || | ||| ||||| ||| |||| |||| | || | | | | | ||| Sbjct 877789 GGCTCGCTGC--TCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCG 877846 Query 147892 GCGTGCCAGGGTTCAATGTAGACGGCCA--GCG-CACCTTTACGCTTTCCGCCCTGGTCG 147948 ||||||||| || | ||| | ||| | ||| || | | || || ||||| || Sbjct 877847 AAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCAGGTCTTTTGTTCCCCCCCTGATCA 877906 Query 147949 ACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCG 148008 |||| ||| | ||||||| | || | || ||| || | || ||| | | | |||| Sbjct 877907 ACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCG 877966 Query 148009 TTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCG 148068 |||||| ||| | ||| || || || | | || |||||||| || Sbjct 877967 TTGGTGCCGGCGATGTAGCTCCCCGTGGATCTAATGCAGCTGACTGCCACGCCAATCCCT 878026 Query 148069 CCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTG 148128 || | | || || ||| ||||||| || || |||||| || ||||||||| Sbjct 878027 CCAGCTGATTTGGAGATGAGGGCGCAATGCTTCAGCGTGTCGTAGATCCCCTCGATGCTG 878086 Query 148129 TCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAG 148188 || | || | | | |||| || || ||| ||||| | ||||| || | Sbjct 878087 TCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCATTG 878146 Query 148189 AAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATA 148248 || ||||| || ||||| || ||| | || | || || | || ||||| || Sbjct 878147 AAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCGATG 878206 Query 148249 GCGTCTTCGATGT-CGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGG 148307 | ||||||| | |||| ||||| || |||| || || | ||||||||||||||| || Sbjct 878207 ACTGCTTCGATATCCGTC-CCGTGGATTCCCACAGCCACCCTCATGAGCATGTGCTGCGG 878265 Query 148308 TCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367 || || || |||| |||||||| || || || || || || ||| | || Sbjct 878266 ACGCTCAGCTACTTTGCCATTGATCTTTAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCC 878325 Query 148368 AAAGTACTTGTA 148379 |||| | ||||| Sbjct 878326 AAAGAAGTTGTA 878337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476568090516960